RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 SSTR4P31391 388 aa15.41■□□□□ 0.06
CCDC43-202ENST00000457422 RBM34P42696 430 aaKnown RBP15.41■□□□□ 0.06
CCDC43-202ENST00000457422 ACAA2P42765 397 aaKnown RBP15.41■□□□□ 0.06
CCDC43-202ENST00000457422 GABRA4P48169 554 aa15.41■□□□□ 0.06
CCDC43-202ENST00000457422 TGM4P49221 684 aa15.41■□□□□ 0.06
CCDC43-202ENST00000457422 DEFA1P59665 94 aa15.41■□□□□ 0.06
CCDC43-202ENST00000457422 DEFA3P59666 94 aa15.41■□□□□ 0.06
CCDC43-202ENST00000457422 SMAD4Q13485 552 aaKnown RBP15.41■□□□□ 0.06
CCDC43-202ENST00000457422 ZNF141Q15928 474 aa15.41■□□□□ 0.06
CCDC43-202ENST00000457422 CRTC2Q53ET0 693 aaPredicted RBP15.41■□□□□ 0.06
CCDC43-202ENST00000457422 GKN2Q86XP6 184 aa15.41■□□□□ 0.06
CCDC43-202ENST00000457422 LSMEM1Q8N8F7 131 aa15.41■□□□□ 0.06
CCDC43-202ENST00000457422 OR4N2Q8NGD1 307 aa15.41■□□□□ 0.06
CCDC43-202ENST00000457422 OR6C4Q8NGE1 309 aa15.41■□□□□ 0.06
CCDC43-202ENST00000457422 LMX1AQ8TE12 382 aa15.41■□□□□ 0.06
CCDC43-202ENST00000457422 GRHL3Q8TE85 626 aa15.41■□□□□ 0.06
CCDC43-202ENST00000457422 C1GALT1C1Q96EU7 318 aa15.41■□□□□ 0.06
CCDC43-202ENST00000457422 RBM18Q96H35 190 aaKnown RBP15.41■□□□□ 0.06
CCDC43-202ENST00000457422 SECISBP2Q96T21 854 aaKnown RBP15.41■□□□□ 0.06
CCDC43-202ENST00000457422 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.41■□□□□ 0.06
CCDC43-202ENST00000457422 TRIM2Q9C040 744 aa15.41■□□□□ 0.06
CCDC43-202ENST00000457422 RERGLQ9H628 205 aa15.41■□□□□ 0.06
CCDC43-202ENST00000457422 CMC2Q9NRP2 79 aa15.41■□□□□ 0.06
CCDC43-202ENST00000457422 FLRT3Q9NZU0 649 aa15.41■□□□□ 0.06
CCDC43-202ENST00000457422 GSTK1Q9Y2Q3 226 aa15.41■□□□□ 0.06
CCDC43-202ENST00000457422 GON4LQ3T8J9 2241 aa15.41■□□□□ 0.06
CCDC43-202ENST00000457422 PRUNE2Q8WUY3 3088 aa15.41■□□□□ 0.06
CCDC43-202ENST00000457422 A0A1W2PR77 199 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 FAM183AA6NL82 134 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 NPIPB9F8W1W9 429 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 RGS5O15539 181 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 CD27P26842 260 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 FABP5Q01469 135 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 BDH1Q02338 343 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 MXD1Q05195 221 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 PLBD1Q6P4A8 553 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 SMARCD3Q6STE5 483 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 TMPRSS11AQ6ZMR5 421 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 MEPCEQ7L2J0 689 aaKnown RBP15.4■□□□□ 0.06
CCDC43-202ENST00000457422 SLC43A2Q8N370 569 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 SIRT6Q8N6T7 355 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 ZFP41Q8N8Y5 198 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 OR13C2Q8NGS9 318 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 ZNF578Q96N58 590 aaPredicted RBP15.4■□□□□ 0.06
CCDC43-202ENST00000457422 PHOX2BQ99453 314 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 PHF7Q9BWX1 381 aaPredicted RBP15.4■□□□□ 0.06
CCDC43-202ENST00000457422 ENKD1Q9H0I2 346 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 PRTFDC1Q9NRG1 225 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.4■□□□□ 0.06
CCDC43-202ENST00000457422 PLEKHB1Q9UF11 243 aaPredicted RBP15.4■□□□□ 0.06
CCDC43-202ENST00000457422 CA14Q9ULX7 337 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 DTX4Q9Y2E6 619 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 CMAHPQ9Y471 501 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 A0A1B0GWA3 101 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 FAM86C2PA6NEL3 165 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 CLDN4O14493 209 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 HCN1O60741 890 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 PRAMEF2O60811 474 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 PTP4A3O75365 173 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 PAICSP22234 425 aaKnown RBP15.4■□□□□ 0.06
CCDC43-202ENST00000457422 CD38P28907 300 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 GPR3P46089 330 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 HNRNPA0Q13151 305 aaKnown RBP15.4■□□□□ 0.06
CCDC43-202ENST00000457422 FZD5Q13467 585 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 ERV3-1Q14264 604 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 FGFBP1Q14512 234 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 PRPF38BQ5VTL8 546 aaKnown RBP15.4■□□□□ 0.06
CCDC43-202ENST00000457422 THSD4Q6ZMP0 1018 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 C17orf82Q86X59 251 aaPredicted RBP15.4■□□□□ 0.06
CCDC43-202ENST00000457422 LAX1Q8IWV1 398 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 ARIH2OSQ8N7S6 290 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 FAM181AQ8N9Y4 354 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 HTRA1Q92743 480 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 OTULINQ96BN8 352 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 TM9SF2Q99805 663 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 TPK1Q9H3S4 243 aa15.4■□□□□ 0.06
CCDC43-202ENST00000457422 ZNF749O43361 778 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 RFPL3O75679 317 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 CLEC2LP0C7M8 214 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 SDC2P34741 201 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 ATP6V1E1P36543 226 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 FOXK2Q01167 660 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 ZNF791Q3KP31 576 aaPredicted RBP15.39■□□□□ 0.05
CCDC43-202ENST00000457422 ZNF322Q6U7Q0 402 aaPredicted RBP15.39■□□□□ 0.05
CCDC43-202ENST00000457422 NPSR1Q6W5P4 371 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 SPRYD4Q8WW59 207 aaPredicted RBP15.39■□□□□ 0.05
CCDC43-202ENST00000457422 KISS1RQ969F8 398 aaPredicted RBP15.39■□□□□ 0.05
CCDC43-202ENST00000457422 PTCHD1Q96NR3 888 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 DGAT2Q96PD7 388 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 SLC38A3Q99624 504 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 KATNB1Q9BVA0 655 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 CHRNA10Q9GZZ6 450 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 TTYH1Q9H313 450 aaPredicted RBP15.39■□□□□ 0.05
CCDC43-202ENST00000457422 MED20Q9H944 212 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 PLCL2Q9UPR0 1127 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 BAIAP2Q9UQB8 552 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 OR2W5A6NFC9 320 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 TTC36A6NLP5 189 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 METTL12A8MUP2 240 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 ADAM11O75078 769 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms