RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 UNC50Q53HI1 259 aa20.48■□□□□ 0.87
PTPRA-208ENST00000455631 ZNF551Q7Z340 670 aaPredicted RBP20.48■□□□□ 0.87
PTPRA-208ENST00000455631 CDRT4Q8N9R6 151 aa20.48■□□□□ 0.87
PTPRA-208ENST00000455631 OR52N5Q8NH56 324 aa20.48■□□□□ 0.87
PTPRA-208ENST00000455631 FBXO27Q8NI29 283 aa20.48■□□□□ 0.87
PTPRA-208ENST00000455631 HOXB13Q92826 284 aaPredicted RBP20.48■□□□□ 0.87
PTPRA-208ENST00000455631 C3orf49Q96BT1 292 aa20.48■□□□□ 0.87
PTPRA-208ENST00000455631 MSI2Q96DH6 328 aaKnown RBP20.48■□□□□ 0.87
PTPRA-208ENST00000455631 ACSS3Q9H6R3 686 aa20.48■□□□□ 0.87
PTPRA-208ENST00000455631 MYNNQ9NPC7 610 aa20.48■□□□□ 0.87
PTPRA-208ENST00000455631 UBQLN4Q9NRR5 601 aa20.48■□□□□ 0.87
PTPRA-208ENST00000455631 SIRT5Q9NXA8 310 aa20.48■□□□□ 0.87
PTPRA-208ENST00000455631 ING1Q9UK53 422 aaPredicted RBP20.48■□□□□ 0.87
PTPRA-208ENST00000455631 POLR3HQ9Y535 204 aaPredicted RBP20.48■□□□□ 0.87
PTPRA-208ENST00000455631 TIMM22Q9Y584 194 aa20.48■□□□□ 0.87
PTPRA-208ENST00000455631 ESYT3A0FGR9 886 aa20.47■□□□□ 0.87
PTPRA-208ENST00000455631 C9JVG2 144 aa20.47■□□□□ 0.87
PTPRA-208ENST00000455631 RGS14O43566 566 aa20.47■□□□□ 0.87
PTPRA-208ENST00000455631 RAD51DO75771 328 aa20.47■□□□□ 0.87
PTPRA-208ENST00000455631 KCNK2O95069 426 aa20.47■□□□□ 0.87
PTPRA-208ENST00000455631 INHBAP08476 426 aa20.47■□□□□ 0.87
PTPRA-208ENST00000455631 PTAFRP25105 342 aa20.47■□□□□ 0.87
PTPRA-208ENST00000455631 PHBP35232 272 aa20.47■□□□□ 0.87
PTPRA-208ENST00000455631 MAP3K8P41279 467 aa20.47■□□□□ 0.87
PTPRA-208ENST00000455631 ZNF678Q5SXM1 525 aa20.47■□□□□ 0.87
PTPRA-208ENST00000455631 KLHL17Q6TDP4 642 aa20.47■□□□□ 0.87
PTPRA-208ENST00000455631 DEPDC4Q8N2C3 294 aa20.47■□□□□ 0.87
PTPRA-208ENST00000455631 SPATA4Q8NEY3 305 aa20.47■□□□□ 0.87
PTPRA-208ENST00000455631 FAM110BQ8TC76 370 aa20.47■□□□□ 0.87
PTPRA-208ENST00000455631 ZNF775Q96BV0 537 aaPredicted RBP20.47■□□□□ 0.87
PTPRA-208ENST00000455631 TMEM237Q96Q45 408 aa20.47■□□□□ 0.87
PTPRA-208ENST00000455631 ZNF300Q96RE9 604 aaPredicted RBP20.47■□□□□ 0.87
PTPRA-208ENST00000455631 KCNA7Q96RP8 456 aa20.47■□□□□ 0.87
PTPRA-208ENST00000455631 PLA2G12AQ9BZM1 189 aa20.47■□□□□ 0.87
PTPRA-208ENST00000455631 RAB17Q9H0T7 212 aa20.47■□□□□ 0.87
PTPRA-208ENST00000455631 KIF2AO00139 706 aaPredicted RBP20.46■□□□□ 0.87
PTPRA-208ENST00000455631 PGM3O95394 542 aa20.46■□□□□ 0.87
PTPRA-208ENST00000455631 IFI6P09912 130 aa20.46■□□□□ 0.87
PTPRA-208ENST00000455631 ACP2P11117 423 aa20.46■□□□□ 0.87
PTPRA-208ENST00000455631 BMP4P12644 408 aa20.46■□□□□ 0.87
PTPRA-208ENST00000455631 APEHP13798 732 aaKnown RBP20.46■□□□□ 0.87
PTPRA-208ENST00000455631 CD40P25942 277 aa20.46■□□□□ 0.87
PTPRA-208ENST00000455631 SLC7A1P30825 629 aa20.46■□□□□ 0.87
PTPRA-208ENST00000455631 ZNF117Q03924 483 aa20.46■□□□□ 0.87
PTPRA-208ENST00000455631 CHRNEQ04844 493 aa20.46■□□□□ 0.87
PTPRA-208ENST00000455631 RASGEF1BQ0VAM2 473 aa20.46■□□□□ 0.87
PTPRA-208ENST00000455631 UBAP2Q5T6F2 1119 aaKnown RBP20.46■□□□□ 0.87
PTPRA-208ENST00000455631 ZNF100Q8IYN0 542 aa20.46■□□□□ 0.87
PTPRA-208ENST00000455631 TMEM151AQ8N4L1 468 aa20.46■□□□□ 0.87
PTPRA-208ENST00000455631 OR6Y1Q8NGX8 325 aa20.46■□□□□ 0.87
PTPRA-208ENST00000455631 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.46■□□□□ 0.872e-6■■■□□ 18.8
PTPRA-208ENST00000455631 OTUB1Q96FW1 271 aaPredicted RBP20.46■□□□□ 0.87
PTPRA-208ENST00000455631 A0A1W2PNR3 127 aa20.45■□□□□ 0.86
PTPRA-208ENST00000455631 A0A1W2PQD3 144 aa20.45■□□□□ 0.86
PTPRA-208ENST00000455631 CCDC151A5D8V7 595 aa20.45■□□□□ 0.86
PTPRA-208ENST00000455631 SPRY1O43609 319 aaPredicted RBP20.45■□□□□ 0.86
PTPRA-208ENST00000455631 ENO1P06733 434 aaKnown RBP20.45■□□□□ 0.86
PTPRA-208ENST00000455631 ARL13AQ5H913 290 aaPredicted RBP20.45■□□□□ 0.86
PTPRA-208ENST00000455631 CCNJQ5T5M9 372 aa20.45■□□□□ 0.86
PTPRA-208ENST00000455631 ZNF544Q6NX49 715 aa20.45■□□□□ 0.86
PTPRA-208ENST00000455631 ZNF433Q8N7K0 673 aaPredicted RBP20.45■□□□□ 0.86
PTPRA-208ENST00000455631 SLC16A11Q8NCK7 471 aa20.45■□□□□ 0.86
PTPRA-208ENST00000455631 CEP70Q8NHQ1 597 aa20.45■□□□□ 0.86
PTPRA-208ENST00000455631 PHOSPHO1Q8TCT1 267 aa20.45■□□□□ 0.86
PTPRA-208ENST00000455631 MS4A4EQ96PG1 132 aa20.45■□□□□ 0.86
PTPRA-208ENST00000455631 PIMREGQ9BSJ6 248 aa20.45■□□□□ 0.86
PTPRA-208ENST00000455631 INPP5KQ9BT40 448 aa20.45■□□□□ 0.86
PTPRA-208ENST00000455631 PRR14Q9BWN1 585 aa20.45■□□□□ 0.86
PTPRA-208ENST00000455631 GPC6Q9Y625 555 aaPredicted RBP20.45■□□□□ 0.86
PTPRA-208ENST00000455631 A0A1W2PR80 420 aa20.44■□□□□ 0.86
PTPRA-208ENST00000455631 M0R1B8 84 aa20.44■□□□□ 0.86
PTPRA-208ENST00000455631 TCF21O43680 179 aa20.44■□□□□ 0.86
PTPRA-208ENST00000455631 TAC1P20366 129 aa20.44■□□□□ 0.86
PTPRA-208ENST00000455631 LCN1P31025 176 aa20.44■□□□□ 0.86
PTPRA-208ENST00000455631 PDLIM4P50479 330 aa20.44■□□□□ 0.86
PTPRA-208ENST00000455631 RNF144AP50876 292 aaPredicted RBP20.44■□□□□ 0.86
PTPRA-208ENST00000455631 RAC3P60763 192 aa20.44■□□□□ 0.86
PTPRA-208ENST00000455631 CHRNB3Q05901 458 aa20.44■□□□□ 0.86
PTPRA-208ENST00000455631 DUSP5Q16690 384 aa20.44■□□□□ 0.86
PTPRA-208ENST00000455631 IMPG1Q17R60 797 aa20.44■□□□□ 0.86
PTPRA-208ENST00000455631 C12orf54Q6X4T0 127 aa20.44■□□□□ 0.86
PTPRA-208ENST00000455631 MEX3DQ86XN8 651 aaKnown RBP20.44■□□□□ 0.86
PTPRA-208ENST00000455631 COX18Q8N8Q8 333 aa20.44■□□□□ 0.86
PTPRA-208ENST00000455631 NUP43Q8NFH3 380 aa20.44■□□□□ 0.86
PTPRA-208ENST00000455631 C1orf159Q96HA4 380 aa20.44■□□□□ 0.86
PTPRA-208ENST00000455631 C12orf65Q9H3J6 166 aaKnown RBP20.44■□□□□ 0.86
PTPRA-208ENST00000455631 STK38LQ9Y2H1 464 aa20.44■□□□□ 0.86
PTPRA-208ENST00000455631 ATP23Q9Y6H3 246 aa20.44■□□□□ 0.86
PTPRA-208ENST00000455631 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.43■□□□□ 0.86
PTPRA-208ENST00000455631 CIB4A0PJX0 185 aa20.43■□□□□ 0.86
PTPRA-208ENST00000455631 VWC2LB2RUY7 222 aa20.43■□□□□ 0.86
PTPRA-208ENST00000455631 SMAD9O15198 467 aaKnown RBP20.43■□□□□ 0.86
PTPRA-208ENST00000455631 PDPK1O15530 556 aa20.43■□□□□ 0.86
PTPRA-208ENST00000455631 CYTIPO60759 359 aa20.43■□□□□ 0.86
PTPRA-208ENST00000455631 IGHV3-9P01782 118 aa20.43■□□□□ 0.86
PTPRA-208ENST00000455631 NR4A2P43354 598 aa20.43■□□□□ 0.86
PTPRA-208ENST00000455631 SELENBP1Q13228 472 aa20.43■□□□□ 0.86
PTPRA-208ENST00000455631 ANKRD26P1Q6NSI1 321 aa20.43■□□□□ 0.86
PTPRA-208ENST00000455631 CBLN3Q6UW01 205 aa20.43■□□□□ 0.86
PTPRA-208ENST00000455631 IKBIPQ70UQ0 350 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms