RNA–Protein interactions for RNA: ENST00000453937.2

LAMA4-209, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-209ENST00000453937 CMPK2Q5EBM0 449 aa13.22□□□□□ -0.29
LAMA4-209ENST00000453937 LCN8Q6JVE9 175 aa13.22□□□□□ -0.29
LAMA4-209ENST00000453937 ULK2Q8IYT8 1036 aa13.22□□□□□ -0.29
LAMA4-209ENST00000453937 SMYD1Q8NB12 490 aa13.22□□□□□ -0.29
LAMA4-209ENST00000453937 OR4D11Q8NGI4 311 aa13.22□□□□□ -0.29
LAMA4-209ENST00000453937 OR5W2Q8NH69 310 aa13.22□□□□□ -0.29
LAMA4-209ENST00000453937 B4GALNT2Q8NHY0 566 aa13.22□□□□□ -0.29
LAMA4-209ENST00000453937 SNRNP40Q96DI7 357 aaKnown RBP13.22□□□□□ -0.29
LAMA4-209ENST00000453937 ASB9Q96DX5 294 aa13.22□□□□□ -0.29
LAMA4-209ENST00000453937 C1GALT1C1Q96EU7 318 aa13.22□□□□□ -0.29
LAMA4-209ENST00000453937 SH3YL1Q96HL8 342 aaPredicted RBP13.22□□□□□ -0.29
LAMA4-209ENST00000453937 NPAS1Q99742 590 aa13.22□□□□□ -0.29
LAMA4-209ENST00000453937 ARHGDIGQ99819 225 aa13.22□□□□□ -0.29
LAMA4-209ENST00000453937 MMADHCQ9H3L0 296 aaPredicted RBP13.22□□□□□ -0.29
LAMA4-209ENST00000453937 HHATLQ9HCP6 504 aa13.22□□□□□ -0.29
LAMA4-209ENST00000453937 PLSCR2Q9NRY7 297 aa13.22□□□□□ -0.29
LAMA4-209ENST00000453937 DCAF13Q9NV06 445 aaKnown RBP13.22□□□□□ -0.29
LAMA4-209ENST00000453937 OLAHQ9NV23 265 aa13.22□□□□□ -0.29
LAMA4-209ENST00000453937 QPCTLQ9NXS2 382 aa13.22□□□□□ -0.29
LAMA4-209ENST00000453937 SLC7A8Q9UHI5 535 aa13.22□□□□□ -0.29
LAMA4-209ENST00000453937 MAGEL2Q9UJ55 1249 aa13.22□□□□□ -0.29
LAMA4-209ENST00000453937 ANAPC2Q9UJX6 822 aa13.22□□□□□ -0.29
LAMA4-209ENST00000453937 TCRBV5S2A0A599 114 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 ANKUB1A6NFN9 424 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 FAM166BA8MTA8 275 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 GTPBP1O00178 669 aaKnown RBP13.21□□□□□ -0.29
LAMA4-209ENST00000453937 FAAHO00519 579 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 AP3D1O14617 1153 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 GSTA4O15217 222 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 HCRTR2O43614 444 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 NTN1O95631 604 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 IGHG3P01860 377 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 HPNP05981 417 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 FESP07332 822 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 LINGO3P0C6S8 592 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 MAGEA5P43359 124 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 MASP1P48740 699 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 TDGF1P3P51864 188 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 B3GALT5-AS1P59052 145 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 PPIAP62937 165 aaKnown RBP13.21□□□□□ -0.29
LAMA4-209ENST00000453937 SELENOWP63302 87 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 EPS8Q12929 822 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 TRAP1Q12931 704 aaKnown RBP13.21□□□□□ -0.29
LAMA4-209ENST00000453937 NFATC3Q12968 1075 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 TOMM34Q15785 309 aaPredicted RBP13.21□□□□□ -0.29
LAMA4-209ENST00000453937 NPTX1Q15818 432 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 ZSCAN26Q16670 478 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 ARSKQ6UWY0 536 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 TSEN54Q7Z6J9 526 aaKnown RBP13.21□□□□□ -0.29
LAMA4-209ENST00000453937 LACC1Q8IV20 430 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 CHERPQ8IWX8 916 aaKnown RBP13.21□□□□□ -0.29
LAMA4-209ENST00000453937 CISD2Q8N5K1 135 aaKnown RBP13.21□□□□□ -0.29
LAMA4-209ENST00000453937 FAM86B1Q8N7N1 296 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 FAM98AQ8NCA5 519 aaKnown RBP13.21□□□□□ -0.29
LAMA4-209ENST00000453937 BHLHE22Q8NFJ8 381 aaPredicted RBP13.21□□□□□ -0.29
LAMA4-209ENST00000453937 JSRP1Q96MG2 331 aaPredicted RBP13.21□□□□□ -0.29
LAMA4-209ENST00000453937 OR2B2Q9GZK3 357 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 MUC13Q9H3R2 512 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 ACKR4Q9NPB9 350 aa13.21□□□□□ -0.29
LAMA4-209ENST00000453937 SHANK1Q9Y566 2161 aa13.21□□□□□ -0.3
LAMA4-209ENST00000453937 PRRC2CQ9Y520 2896 aaKnown RBP13.2□□□□□ -0.3
LAMA4-209ENST00000453937 FRS3O43559 492 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 SEMA7AO75326 666 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 C1QL1O75973 258 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 SERPINA1P01009 418 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 SEMG1P04279 462 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 GKN3PP0CG01 181 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 PSMA4P25789 261 aaKnown RBP13.2□□□□□ -0.3
LAMA4-209ENST00000453937 SRD5A2P31213 254 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 DSCR4P56555 118 aaPredicted RBP13.2□□□□□ -0.3
LAMA4-209ENST00000453937 FOXK1P85037 733 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 PLPPR5Q32ZL2 321 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 IQCCQ4KMZ1 466 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 LRRC23Q53EV4 343 aaPredicted RBP13.2□□□□□ -0.3
LAMA4-209ENST00000453937 EIPR1Q53HC9 387 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 SLC25A53Q5H9E4 307 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 VTCN1Q7Z7D3 282 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 SLC22A16Q86VW1 577 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 TSPYL5Q86VY4 417 aaPredicted RBP13.2□□□□□ -0.3
LAMA4-209ENST00000453937 ZNF440Q8IYI8 595 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 EID3Q8N140 333 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 FAM109AQ8N4B1 249 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 OR4K17Q8NGC6 315 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 OR10Q1Q8NGQ4 319 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 POC1BQ8TC44 478 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 PHF10Q8WUB8 498 aaKnown RBP13.2□□□□□ -0.3
LAMA4-209ENST00000453937 FAR1Q8WVX9 515 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 RASSF5Q8WWW0 418 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 NR4A3Q92570 626 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 RNF145Q96MT1 663 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 SLX1AQ9BQ83 275 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 EVA1AQ9H8M9 152 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 MED17Q9NVC6 651 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 PRDM4Q9UKN5 801 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 POMPQ9Y244 141 aa13.2□□□□□ -0.3
LAMA4-209ENST00000453937 ZNF407Q9C0G0 2248 aa13.19□□□□□ -0.3
LAMA4-209ENST00000453937 C7orf72A4D263 438 aa13.19□□□□□ -0.3
LAMA4-209ENST00000453937 SUV39H1O43463 412 aa13.19□□□□□ -0.3
LAMA4-209ENST00000453937 IFNA14P01570 189 aa13.19□□□□□ -0.3
LAMA4-209ENST00000453937 ZNF24P17028 368 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms