RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 HSD17B8Q92506 261 aa10.39□□□□□ -0.75
HERC3-207ENST00000452979 NPAS1Q99742 590 aa10.39□□□□□ -0.75
HERC3-207ENST00000452979 USB1Q9BQ65 265 aaKnown RBP10.39□□□□□ -0.75
HERC3-207ENST00000452979 TACO1Q9BSH4 297 aaKnown RBP10.39□□□□□ -0.75
HERC3-207ENST00000452979 GRIP2Q9C0E4 1043 aa10.39□□□□□ -0.75
HERC3-207ENST00000452979 ESRP2Q9H6T0 727 aaKnown RBP10.39□□□□□ -0.75
HERC3-207ENST00000452979 GP6Q9HCN6 339 aa10.39□□□□□ -0.75
HERC3-207ENST00000452979 NGBQ9NPG2 151 aa10.39□□□□□ -0.75
HERC3-207ENST00000452979 MIEF1Q9NQG6 463 aa10.39□□□□□ -0.75
HERC3-207ENST00000452979 DDX18Q9NVP1 670 aaKnown RBP10.39□□□□□ -0.75
HERC3-207ENST00000452979 LIPT1Q9Y234 373 aa10.39□□□□□ -0.75
HERC3-207ENST00000452979 TRAF6Q9Y4K3 522 aa10.39□□□□□ -0.75
HERC3-207ENST00000452979 MAGED1Q9Y5V3 778 aaPredicted RBP10.39□□□□□ -0.75
HERC3-207ENST00000452979 STAB1Q9NY15 2570 aa10.39□□□□□ -0.75
HERC3-207ENST00000452979 A0A1W2PRB8 838 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 TNFSF11O14788 317 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 NDUFB5O43674 189 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 GMFGO60234 142 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 EDF1O60869 148 aaKnown RBP10.38□□□□□ -0.75
HERC3-207ENST00000452979 SKAP2O75563 359 aaPredicted RBP10.38□□□□□ -0.75
HERC3-207ENST00000452979 CRCPO75575 148 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 NKX2-2O95096 273 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 SNUPNO95149 360 aaKnown RBP10.38□□□□□ -0.75
HERC3-207ENST00000452979 IGHV4-39P01824 125 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 OPN1LWP04000 364 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 PABPC4LP0CB38 370 aaKnown RBP10.38□□□□□ -0.75
HERC3-207ENST00000452979 ACVR1BP36896 505 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 RFX3P48380 749 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 RPL14P50914 215 aaKnown RBP10.38□□□□□ -0.75
HERC3-207ENST00000452979 CARD18P57730 90 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 PDCD2Q16342 344 aaPredicted RBP10.38□□□□□ -0.75
HERC3-207ENST00000452979 PLPPR5Q32ZL2 321 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 ZNF672Q499Z4 452 aaPredicted RBP10.38□□□□□ -0.75
HERC3-207ENST00000452979 PDSS1Q5T2R2 415 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 HBMQ6B0K9 141 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 CGB2Q6NT52 195 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 SEZ6L2Q6UXD5 910 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 OR2T11Q8NH01 316 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 POC1BQ8TC44 478 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 RNF128Q8TEB7 428 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 PIK3R3Q92569 461 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 OSTF1Q92882 214 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 ZNF317Q96PQ6 595 aaPredicted RBP10.38□□□□□ -0.75
HERC3-207ENST00000452979 C12orf49Q9H741 205 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 MYNNQ9NPC7 610 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 YAE1D1Q9NRH1 226 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 MED17Q9NVC6 651 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 FGFR1OP2Q9NVK5 253 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 FBXO34Q9NWN3 711 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.38□□□□□ -0.75
HERC3-207ENST00000452979 CCL27Q9Y4X3 112 aa10.38□□□□□ -0.75
HERC3-207ENST00000452979 YLPM1P49750 1951 aaKnown RBP10.37□□□□□ -0.75
HERC3-207ENST00000452979 ABCA1O95477 2261 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 SONP18583 2426 aaKnown RBP10.37□□□□□ -0.75
HERC3-207ENST00000452979 ZNF195O14628 629 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 PIP5K1BO14986 540 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 OXSR1O95747 527 aaPredicted RBP10.37□□□□□ -0.75
HERC3-207ENST00000452979 CD8AP01732 235 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 FESP07332 822 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 LINGO3P0C6S8 592 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 KITP10721 976 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 PRPS2P11908 318 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 NTSP30990 170 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 LCN1P31025 176 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 LSP1P33241 339 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 CDKN1AP38936 164 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 GNGT1P63211 74 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 P2RY6Q15077 328 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 RNPS1Q15287 305 aaKnown RBP10.37□□□□□ -0.75
HERC3-207ENST00000452979 TAB1Q15750 504 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 PGGHGQ32M88 737 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 VPS26BQ4G0F5 336 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 XKR7Q5GH72 579 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 SPDYAQ5MJ70 313 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 TMEM201Q5SNT2 666 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 FIGNL1Q6PIW4 674 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 TFAP2EQ6VUC0 442 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 RNF165Q6ZSG1 346 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 IKBIPQ70UQ0 350 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 TRIM46Q7Z4K8 759 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 MISPQ8IVT2 679 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 LRRC34Q8IZ02 419 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 LILRA2Q8N149 483 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 PIWIL2Q8TC59 973 aaKnown RBP10.37□□□□□ -0.75
HERC3-207ENST00000452979 GPR151Q8TDV0 419 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 SLC9A6Q92581 669 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 NEUROG1Q92886 237 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 GTPBP3Q969Y2 492 aaKnown RBP10.37□□□□□ -0.75
HERC3-207ENST00000452979 ZBED6CLQ96FA7 236 aaPredicted RBP10.37□□□□□ -0.75
HERC3-207ENST00000452979 C3orf30Q96M34 536 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 RNF145Q96MT1 663 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 TRAF4Q9BUZ4 470 aaPredicted RBP10.37□□□□□ -0.75
HERC3-207ENST00000452979 TRIM2Q9C040 744 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 NTMQ9P121 344 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 KLHL13Q9P2N7 655 aa10.37□□□□□ -0.75
HERC3-207ENST00000452979 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.36□□□□□ -0.75
HERC3-207ENST00000452979 A0A1W2PQD3 144 aa10.36□□□□□ -0.75
HERC3-207ENST00000452979 DPRXA6NFQ7 191 aa10.36□□□□□ -0.75
HERC3-207ENST00000452979 A8MV72 311 aaPredicted RBP10.36□□□□□ -0.75
HERC3-207ENST00000452979 CLOCKO15516 846 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms