RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 SLC7A1P30825 629 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 SELENOWP63302 87 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 CHRNB3Q05901 458 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 C17orf67Q0P5P2 114 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 CMPK2Q5EBM0 449 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 ZNF836Q6ZNA1 936 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 CBLL1Q75N03 491 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 SLC22A16Q86VW1 577 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 ARMC8Q8IUR7 673 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 FADS6Q8N9I5 356 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 OR2M3Q8NG83 312 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 OR4K17Q8NGC6 315 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 CPT1CQ8TCG5 803 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 FAR1Q8WVX9 515 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 NR4A3Q92570 626 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 ARSGQ96EG1 525 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 BARD1Q99728 777 aaKnown RBP11.86□□□□□ -0.51
VPS33A-202ENST00000451053 UBQLN3Q9H347 655 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 DCLRE1BQ9H816 532 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.86□□□□□ -0.51
VPS33A-202ENST00000451053 B4GALT7Q9UBV7 327 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 BAG5Q9UL15 447 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 ZNF232Q9UNY5 417 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 ZNF443Q9Y2A4 671 aaPredicted RBP11.86□□□□□ -0.51
VPS33A-202ENST00000451053 CARD8Q9Y2G2 431 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 IFT52Q9Y366 437 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 GPC6Q9Y625 555 aaPredicted RBP11.86□□□□□ -0.51
VPS33A-202ENST00000451053 BSNQ9UPA5 3926 aa11.86□□□□□ -0.51
VPS33A-202ENST00000451053 IGSF10Q6WRI0 2623 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 NPIPA5E9PKD4 350 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 H3BNH8 94 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 GTPBP1O00178 669 aaKnown RBP11.85□□□□□ -0.51
VPS33A-202ENST00000451053 HCRTR2O43614 444 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 CBR3O75828 277 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 OPN1SWP03999 348 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 PABPC4LP0CB38 370 aaKnown RBP11.85□□□□□ -0.51
VPS33A-202ENST00000451053 UBTFL6P0CB48 400 aaPredicted RBP11.85□□□□□ -0.51
VPS33A-202ENST00000451053 FCGR1AP12314 374 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 NID1P14543 1247 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 IL7RP16871 459 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 ADH7P40394 386 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 TDGF1P3P51864 188 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 KCNJ10P78508 379 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 SKP2Q13309 424 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 LARS2Q15031 903 aaKnown RBP11.85□□□□□ -0.51
VPS33A-202ENST00000451053 ZSWIM7Q19AV6 140 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 LIN52Q52LA3 116 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 ZNF311Q5JNZ3 666 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 MRPL2Q5T653 305 aaKnown RBP11.85□□□□□ -0.51
VPS33A-202ENST00000451053 CBLN3Q6UW01 205 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 PRICKLE2Q7Z3G6 844 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 MISPQ8IVT2 679 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 FAM109AQ8N4B1 249 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 B4GALNT2Q8NHY0 566 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 CNOT9Q92600 299 aaKnown RBP11.85□□□□□ -0.51
VPS33A-202ENST00000451053 TAMM41Q96BW9 452 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 SLC47A1Q96FL8 570 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 PYURFQ96I23 114 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 SLX1AQ9BQ83 275 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 DEFB127Q9H1M4 99 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 ARMC7Q9H6L4 198 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 ZDHHC11Q9H8X9 412 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 S100A14Q9HCY8 104 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 CCM2LQ9NUG4 571 aaPredicted RBP11.85□□□□□ -0.51
VPS33A-202ENST00000451053 RLIMQ9NVW2 624 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 SLC13A4Q9UKG4 626 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 ICAM5Q9UMF0 924 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 NPIPA1Q9UND3 350 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 AURKCQ9UQB9 309 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 CHST2Q9Y4C5 530 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 LIPGQ9Y5X9 500 aa11.85□□□□□ -0.51
VPS33A-202ENST00000451053 TLN1Q9Y490 2541 aaKnown RBP11.85□□□□□ -0.51
VPS33A-202ENST00000451053 ZNF264O43296 627 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 CYP7B1O75881 506 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 PRKD3O94806 890 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 MFN2O95140 757 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 THBS1P07996 1170 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 RAP2AP10114 183 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 TCEA1P23193 301 aaKnown RBP11.84□□□□□ -0.51
VPS33A-202ENST00000451053 PRKAR1BP31321 381 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 ERFP50548 548 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 CRYBA2P53672 197 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 EEF1A1P68104 462 aaKnown RBP11.84□□□□□ -0.51
VPS33A-202ENST00000451053 TOMM20Q15388 145 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 IFI44LQ53G44 452 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 EIPR1Q53HC9 387 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 ARSKQ6UWY0 536 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 FKBP9P1Q75LS8 142 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 COMTD1Q86VU5 262 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 CMIPQ8IY22 773 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 ADGRG5Q8IZF4 528 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 CLIP4Q8N3C7 705 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 TMCO5AQ8N6Q1 288 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 FAM71CQ8NEG0 241 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 FAM83FQ8NEG4 500 aaPredicted RBP11.84□□□□□ -0.51
VPS33A-202ENST00000451053 PYDC1Q8WXC3 89 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 GEMIN6Q8WXD5 167 aaKnown RBP11.84□□□□□ -0.51
VPS33A-202ENST00000451053 PROX1Q92786 737 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 C1GALT1C1Q96EU7 318 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 TPD52L3Q96J77 140 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms