RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 C5orf58C9J3I9 102 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 HMGN4O00479 90 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 NME4O00746 187 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 GMNNO75496 209 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 HPNP05981 417 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 NR2F1P10589 423 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 GABRA1P14867 456 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 MAP3K8P41279 467 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 PTDSS1P48651 473 aaKnown RBP15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 SESN3P58005 492 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 HPCAP84074 193 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 PSG6Q00889 435 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 CRYZQ08257 329 aaKnown RBP15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 DUSP5Q16690 384 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 DECR1Q16698 335 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 EXOSC6Q5RKV6 272 aaKnown RBP15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 SLC30A6Q6NXT4 461 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 LRRC74BQ6ZQY2 392 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 WDR53Q7Z5U6 358 aaPredicted RBP15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 IFNEQ86WN2 208 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 C11orf65Q8NCR3 313 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 OR2T12Q8NG77 320 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 CDS1Q92903 461 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 RAB8BQ92930 207 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 REXO5Q96IC2 774 aaKnown RBP15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 TIMP4Q99727 224 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 KCTD14Q9BQ13 255 aaPredicted RBP15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 SPOCK3Q9BQ16 436 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 TMEM38AQ9H6F2 299 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 CBLCQ9ULV8 474 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 FBN2P35556 2912 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 KIAA1549Q9HCM3 1950 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 ELOVL7A1L3X0 281 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 SNPHO15079 494 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 GSTA4O15217 222 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 TSPAN2O60636 221 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 TNFRSF21O75509 655 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 PDE5AO76074 875 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 HSD17B1P14061 328 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 BMP7P18075 431 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 ATP6V1C1P21283 382 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 KRTAP10-9P60411 292 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 MRPS22P82650 360 aaKnown RBP15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 TFF3Q07654 80 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 ARHGAP11BQ3KRB8 267 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 GPAT3Q53EU6 434 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 INTS11Q5TA45 600 aaKnown RBP15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 SEM1Q6ZVN7 128 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 CALHM3Q86XJ0 350 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 FAM83FQ8NEG4 500 aaPredicted RBP15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 EFHD2Q96C19 240 aaPredicted RBP15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 TMCO6Q96DC7 493 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 ZNF583Q96ND8 569 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 G6PC3Q9BUM1 346 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 SERHL2Q9H4I8 314 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 PIF1Q9H611 641 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 S100A14Q9HCY8 104 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 A4GALTQ9NPC4 353 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 CAMK2AQ9UQM7 478 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 ANGPT4Q9Y264 503 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 MYO9AB2RTY4 2548 aa15.48■□□□□ 0.07
PRPF40A-204ENST00000450303 OR6C70A6NIJ9 312 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 BAG2O95816 211 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 C1QCP02747 245 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 HOXD4P09016 255 aaPredicted RBP15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 ARAFP10398 606 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 ANPEPP15144 967 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 ME2P23368 584 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 ELAVL4P26378 380 aaKnown RBP15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 IL12BP29460 328 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 GSK3BP49841 420 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 CRISP3P54108 245 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 CDK6Q00534 326 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 SCARB2Q14108 478 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 DCST1Q5T197 706 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 DCST2Q5T1A1 773 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 VASNQ6EMK4 673 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 OR5M10Q6IEU7 315 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 HEPHL1Q6MZM0 1159 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 ZFP1Q6P2D0 407 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 TMEM81Q6P7N7 255 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 MICU2Q8IYU8 434 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 WDSUB1Q8N9V3 476 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 ACBD4Q8NC06 268 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 CHDHQ8NE62 594 aaPredicted RBP15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 HIPK4Q8NE63 616 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 SLC26A7Q8TE54 656 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 DNAJC9Q8WXX5 260 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 PIK3R3Q92569 461 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 CCDC124Q96CT7 223 aaKnown RBP15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 OTUB1Q96FW1 271 aaPredicted RBP15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 RMND5BQ96G75 393 aaPredicted RBP15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 LURAP1Q96LR2 239 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 TRNT1Q96Q11 434 aaKnown RBP15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 UGT2B28Q9BY64 529 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 CACYBPQ9HB71 228 aaKnown RBP15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 POLE3Q9NRF9 147 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 POMPQ9Y244 141 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 DCHS2Q6V1P9 2916 aa15.47■□□□□ 0.07
PRPF40A-204ENST00000450303 PRORSD1PA6NEY8 169 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms