RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 ALG3Q92685 438 aa6.81□□□□□ -1.32
LINC01961-201ENST00000449954 DNAJC7Q99615 494 aa6.81□□□□□ -1.32
LINC01961-201ENST00000449954 FRMD8P1Q9BZ68 369 aaPredicted RBP6.81□□□□□ -1.32
LINC01961-201ENST00000449954 NARFLQ9H6Q4 476 aa6.81□□□□□ -1.32
LINC01961-201ENST00000449954 CNOT10Q9H9A5 744 aaKnown RBP6.81□□□□□ -1.32
LINC01961-201ENST00000449954 TREM2Q9NZC2 230 aa6.81□□□□□ -1.32
LINC01961-201ENST00000449954 VDAC3Q9Y277 283 aa6.81□□□□□ -1.32
LINC01961-201ENST00000449954 AMDHD2Q9Y303 409 aa6.81□□□□□ -1.32
LINC01961-201ENST00000449954 DNAH1Q9P2D7 4330 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 ZCWPW2A0A1B0GU75 182 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 MAGEB16A2A368 324 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 C5orf63A6NC05 138 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 FRS3O43559 492 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 LIASO43766 372 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 TMPRSS11DO60235 418 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 FADS1O60427 444 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 PRAMEF4O60810 478 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 SH3BGRLO75368 114 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 BCAS2O75934 225 aaPredicted RBP6.8□□□□□ -1.32
LINC01961-201ENST00000449954 MPZL1O95297 269 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 NGFP01138 241 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 CT45A8P0DMV1 189 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 CT45A9P0DMV2 189 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 PCNAP12004 261 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 OMGP23515 440 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 RAG2P55895 527 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 LMO4P61968 165 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 IRF8Q02556 426 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 C17orf67Q0P5P2 114 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 E2F2Q14209 437 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 SLC9A3R2Q15599 337 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 ADIPOQQ15848 244 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 PDK4Q16654 411 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 CT45A2Q5DJT8 189 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 PRAMEF9Q5VWM5 478 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 FBXW9Q5XUX1 488 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 MED27Q6P2C8 311 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 C16orf87Q6PH81 154 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 ADAMTSL2Q86TH1 951 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 ZNF100Q8IYN0 542 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 TCAIMQ8N3R3 496 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 FAM110DQ8TAY7 271 aaPredicted RBP6.8□□□□□ -1.32
LINC01961-201ENST00000449954 EFHD2Q96C19 240 aaPredicted RBP6.8□□□□□ -1.32
LINC01961-201ENST00000449954 ERP27Q96DN0 273 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 NAP1L3Q99457 506 aaPredicted RBP6.8□□□□□ -1.32
LINC01961-201ENST00000449954 KCNS3Q9BQ31 491 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 PSD2Q9BQI7 771 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 BPIFA3Q9BQP9 254 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 OR51B5Q9H339 312 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 DDX31Q9H8H2 851 aaKnown RBP6.8□□□□□ -1.32
LINC01961-201ENST00000449954 NHEJ1Q9H9Q4 299 aaPredicted RBP6.8□□□□□ -1.32
LINC01961-201ENST00000449954 DYNLRB1Q9NP97 96 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 C20orf96Q9NUD7 363 aaPredicted RBP6.8□□□□□ -1.32
LINC01961-201ENST00000449954 FAM120CQ9NX05 1096 aaKnown RBP6.8□□□□□ -1.32
LINC01961-201ENST00000449954 SLC17A6Q9P2U8 582 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 ADAM30Q9UKF2 790 aa6.8□□□□□ -1.32
LINC01961-201ENST00000449954 WNK2Q9Y3S1 2297 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 DNAH9Q9NYC9 4486 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 A0A1W2PR80 420 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 CLPSL1A2RUU4 121 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 SDR42E2A6NKP2 422 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 GJE1A6NN92 205 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 ZNF724A8MTY0 619 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 PGRMC2O15173 223 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 CLDN9O95484 217 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 CCDC175P0C221 793 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 ACHEP22303 614 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 PSMA4P25789 261 aaKnown RBP6.79□□□□□ -1.32
LINC01961-201ENST00000449954 ELK4P28324 431 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 PCGF2P35227 344 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 PIK3CBP42338 1070 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 RFX3P48380 749 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 MANFP55145 182 aaKnown RBP6.79□□□□□ -1.32
LINC01961-201ENST00000449954 SARNPP82979 210 aaKnown RBP6.79□□□□□ -1.32
LINC01961-201ENST00000449954 POU4F1Q01851 419 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 POU3F1Q03052 451 aaPredicted RBP6.79□□□□□ -1.32
LINC01961-201ENST00000449954 MGAT2Q10469 447 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 PDCD1Q15116 288 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 ADRM1Q16186 407 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 SLC9B1Q4ZJI4 515 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 RBM20Q5T481 1227 aaKnown RBP6.79□□□□□ -1.32
LINC01961-201ENST00000449954 R3HCC1LQ7Z5L2 792 aaKnown RBP6.79□□□□□ -1.32
LINC01961-201ENST00000449954 THAP5Q7Z6K1 395 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 TRABD2AQ86V40 505 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 NUDT13Q86X67 352 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 CDYL2Q8N8U2 506 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 C1orf162Q8NEQ5 155 aaPredicted RBP6.79□□□□□ -1.32
LINC01961-201ENST00000449954 OR7G3Q8NG95 312 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 DUSP19Q8WTR2 217 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 RAB39BQ96DA2 213 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 RNF145Q96MT1 663 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 VSTM2LQ96N03 204 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 MUS81Q96NY9 551 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 KATNB1Q9BVA0 655 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 C1QTNF6Q9BXI9 259 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 ZNF717Q9BY31 904 aaPredicted RBP6.79□□□□□ -1.32
LINC01961-201ENST00000449954 SRXN1Q9BYN0 137 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 TMEM185BQ9H7F4 350 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 CXorf36Q9H7Y0 433 aa6.79□□□□□ -1.32
LINC01961-201ENST00000449954 NECAP2Q9NVZ3 263 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 374.3 ms