RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 EIF4E2O60573 245 aaKnown RBP3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 CDC14BO60729 498 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 GALR3O60755 368 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 RDH16O75452 317 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 WBP4O75554 376 aaKnown RBP3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 AKAP3O75969 853 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR2A4O95047 310 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 IFNA17P01571 189 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 APOC3P02656 99 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 NBEAP1P0C6P0 100 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 DUX4L2P0CJ85 424 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 DUX4L3P0CJ86 424 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 DUX4L4P0CJ87 422 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 DUX4L5P0CJ88 424 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 DUX4L6P0CJ89 424 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 DUX4L7P0CJ90 424 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 CSH1P0DML2 217 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 CSH2P0DML3 217 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 UNGP13051 313 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 INSRRP14616 1297 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 ABOP16442 354 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 NT5EP21589 574 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 GCSHP23434 173 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 PTPN3P26045 913 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 STOMP27105 288 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 G0S2P27469 103 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 MAPK4P31152 587 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 AKT1P31749 480 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 YWHABP31946 246 aaKnown RBP3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 BTCP35070 178 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 AHRP35869 848 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 PBX3P40426 434 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 ELK3P41970 407 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 RABIFP47224 123 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 CDX1P47902 265 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 FMO5P49326 533 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 DHPSP49366 369 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 EVX1P49640 407 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 RPL14P50914 215 aaKnown RBP3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 RAB5CP51148 216 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZNF81P51508 661 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 LINC00310P59036 64 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 TAS2R40P59535 323 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 ACTBP60709 375 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 LSM3P62310 102 aaKnown RBP3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 LSM6P62312 80 aaKnown RBP3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 ACTA2P62736 377 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 RPS6P62753 249 aaKnown RBP3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 YWHAZP63104 245 aaKnown RBP3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 ACTG1P63261 375 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 ACTG2P63267 376 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 ACTC1P68032 377 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 ACTA1P68133 377 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 HTD2P86397 168 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 SP3Q02447 781 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 PIGFQ07326 219 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 C2orf80Q0P641 193 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 FABP9Q0Z7S8 132 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 PRKAA1Q13131 559 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 SRSF5Q13243 272 aaKnown RBP3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 BIKQ13323 160 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 MAD2L1BPQ15013 274 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR8G1Q15617 311 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 IMPG1Q17R60 797 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZNF630Q2M218 657 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 NRN1LQ496H8 165 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 CBWD6Q4V339 395 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 SPIN4Q56A73 249 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 ARMC12Q5T9G4 340 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 N4BP2L1Q5TBK1 243 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 MEDAGQ5VYS4 303 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 RNLSQ5VYX0 342 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 WSCD1Q658N2 575 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 CYB5R2Q6BCY4 276 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 RAB12Q6IQ22 244 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 ACSM5Q6NUN0 579 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 SLC30A6Q6NXT4 461 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 TAPT1Q6NXT6 567 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 GJB7Q6PEY0 223 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 SCIMPQ6UWF3 145 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 FAM198BQ6UWH4 519 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 DLK2Q6UY11 383 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 MED25Q71SY5 747 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 DET1Q7L5Y6 550 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 CHMP1BQ7LBR1 199 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZNF367Q7RTV3 350 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 GPR149Q86SP6 731 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 IQCHQ86VS3 1027 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 C10orf107Q8IVU9 208 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 PDZD9Q8IXQ8 264 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 PRSS58Q8IYP2 241 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 CFAP206Q8IYR0 622 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 BLIDQ8IZY5 108 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 SPICQ8N5J4 248 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 RNF148Q8N7C7 305 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 HSD17B11Q8NBQ5 300 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZNF248Q8NDW4 579 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 GPRC5AQ8NFJ5 357 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR6J1Q8NGC5 347 aa3.36□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR2D3Q8NGH3 330 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms