RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 RNF130Q86XS8 419 aa8.47□□□□□ -1.05
NIPBL-202ENST00000448238 NKD2Q969F2 451 aaPredicted RBP8.47□□□□□ -1.05
NIPBL-202ENST00000448238 SH3YL1Q96HL8 342 aaPredicted RBP8.47□□□□□ -1.05
NIPBL-202ENST00000448238 LRIT2A6NDA9 550 aa8.47□□□□□ -1.05
NIPBL-202ENST00000448238 RNGTTO60942 597 aaKnown RBP8.47□□□□□ -1.05
NIPBL-202ENST00000448238 CXCL14O95715 111 aa8.47□□□□□ -1.05
NIPBL-202ENST00000448238 PROX2Q3B8N5 592 aa8.47□□□□□ -1.05
NIPBL-202ENST00000448238 FA2HQ7L5A8 372 aa8.47□□□□□ -1.05
NIPBL-202ENST00000448238 SIAH1Q8IUQ4 282 aa8.47□□□□□ -1.05
NIPBL-202ENST00000448238 OR13C8Q8NGS7 320 aa8.47□□□□□ -1.05
NIPBL-202ENST00000448238 ASB11Q8WXH4 323 aa8.47□□□□□ -1.05
NIPBL-202ENST00000448238 MCOLN1Q9GZU1 580 aa8.47□□□□□ -1.05
NIPBL-202ENST00000448238 ZNF160Q9HCG1 818 aa8.47□□□□□ -1.05
NIPBL-202ENST00000448238 CACNA1IQ9P0X4 2223 aa8.47□□□□□ -1.05
NIPBL-202ENST00000448238 IRAK2O43187 625 aa8.46□□□□□ -1.05
NIPBL-202ENST00000448238 P04436 131 aa8.46□□□□□ -1.05
NIPBL-202ENST00000448238 CBR1P16152 277 aa8.46□□□□□ -1.05
NIPBL-202ENST00000448238 ADRA1BP35368 520 aa8.46□□□□□ -1.05
NIPBL-202ENST00000448238 SLC22A6Q4U2R8 563 aa8.46□□□□□ -1.05
NIPBL-202ENST00000448238 AADACL2Q6P093 401 aa8.46□□□□□ -1.05
NIPBL-202ENST00000448238 SCGB1D4Q6XE38 83 aa8.46□□□□□ -1.05
NIPBL-202ENST00000448238 NLRC3Q7RTR2 1065 aa8.46□□□□□ -1.05
NIPBL-202ENST00000448238 CDH26Q8IXH8 852 aa8.46□□□□□ -1.05
NIPBL-202ENST00000448238 SMOQ99835 787 aa8.46□□□□□ -1.05
NIPBL-202ENST00000448238 OR2J3O76001 311 aa8.46□□□□□ -1.05
NIPBL-202ENST00000448238 MAMDC4Q6UXC1 1216 aa8.46□□□□□ -1.05
NIPBL-202ENST00000448238 SLC51AQ86UW1 340 aa8.46□□□□□ -1.05
NIPBL-202ENST00000448238 OR51B5Q9H339 312 aa8.46□□□□□ -1.05
NIPBL-202ENST00000448238 RDH14Q9HBH5 336 aa8.46□□□□□ -1.05
NIPBL-202ENST00000448238 OXSMQ9NWU1 459 aa8.46□□□□□ -1.05
NIPBL-202ENST00000448238 MANSC4A6NHS7 340 aaPredicted RBP8.46□□□□□ -1.05
NIPBL-202ENST00000448238 PLRG1O43660 514 aaKnown RBP8.46□□□□□ -1.05
NIPBL-202ENST00000448238 HSBP1O75506 76 aa8.46□□□□□ -1.05
NIPBL-202ENST00000448238 APBB3O95704 486 aa8.46□□□□□ -1.05
NIPBL-202ENST00000448238 DUSP3P51452 185 aaPredicted RBP8.46□□□□□ -1.05
NIPBL-202ENST00000448238 FAM182AQ5T1J6 154 aa8.46□□□□□ -1.05
NIPBL-202ENST00000448238 CISD2Q8N5K1 135 aaKnown RBP8.46□□□□□ -1.05
NIPBL-202ENST00000448238 TMEM43Q9BTV4 400 aa8.46□□□□□ -1.05
NIPBL-202ENST00000448238 DEFB126Q9BYW3 111 aa8.46□□□□□ -1.05
NIPBL-202ENST00000448238 AP5S1Q9NUS5 200 aa8.46□□□□□ -1.05
NIPBL-202ENST00000448238 EHFQ9NZC4 300 aa8.46□□□□□ -1.05
NIPBL-202ENST00000448238 SH3BGRL2Q9UJC5 107 aa8.46□□□□□ -1.05
NIPBL-202ENST00000448238 TRBV23OR9-2A0A075B6M9 112 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 MEIOCA2RUB1 952 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 B4GALT2O60909 372 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 ACSM4P0C7M7 580 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 CRHBPP24387 322 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 MRPS6P82932 125 aaKnown RBP8.46□□□□□ -1.06
NIPBL-202ENST00000448238 SPCS2Q15005 226 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 TMEM201Q5SNT2 666 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 TMEM236Q5W0B7 351 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 RPL22L1Q6P5R6 122 aaKnown RBP8.46□□□□□ -1.06
NIPBL-202ENST00000448238 STT3BQ8TCJ2 826 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 SLC35C1Q96A29 364 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 TP53RKQ96S44 253 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 SUCNR1Q9BXA5 334 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 RAB6CQ9H0N0 254 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 GSX1Q9H4S2 264 aaPredicted RBP8.46□□□□□ -1.06
NIPBL-202ENST00000448238 MRPL15Q9P015 296 aaKnown RBP8.46□□□□□ -1.06
NIPBL-202ENST00000448238 RHBDD3Q9Y3P4 386 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 SDK2Q58EX2 2172 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 LOC285095A0A1B0GVY8 99 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 LRRC3CA6NJW4 275 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 TNFSF9P41273 254 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 HIST1H3AP68431 136 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 CARFQ8N187 725 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 ADAMTS14Q8WXS8 1223 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 BIRC7Q96CA5 298 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 CABLES2Q9BTV7 478 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 SMIM3Q9BZL3 60 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 GPR88Q9GZN0 384 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 A6NDN8 102 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 H3BQ06 376 aaPredicted RBP8.46□□□□□ -1.06
NIPBL-202ENST00000448238 DENRO43583 198 aaKnown RBP8.46□□□□□ -1.06
NIPBL-202ENST00000448238 CFIP05156 583 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 WNT4P56705 351 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 ZNF90Q03938 601 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 OPCMLQ14982 345 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 ZDHHC14Q8IZN3 488 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 APH1BQ8WW43 257 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 MENTQ9BUN1 341 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 OCEL1Q9H607 264 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 IL17RBQ9NRM6 502 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 FBXO34Q9NWN3 711 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 KLK4Q9Y5K2 254 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 URGCP-MRPS24S4R325 110 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 USP42Q9H9J4 1324 aaKnown RBP8.46□□□□□ -1.06
NIPBL-202ENST00000448238 OPN1SWP03999 348 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 TGM1P22735 817 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 AGTR2P50052 363 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 SMAGPQ0VAQ4 97 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 ATP6V1FQ16864 119 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 AADACL3Q5VUY0 350 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 EEF1DP3Q658K8 133 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 AMMECR1LQ6DCA0 310 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 CDC42EP5Q6NZY7 148 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 TRMT2AQ8IZ69 625 aaKnown RBP8.46□□□□□ -1.06
NIPBL-202ENST00000448238 C1orf52Q8N6N3 182 aaKnown RBP8.46□□□□□ -1.06
NIPBL-202ENST00000448238 OR11L1Q8NGX0 322 aa8.46□□□□□ -1.06
NIPBL-202ENST00000448238 COPS9Q8WXC6 57 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms