RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 REM1O75628 298 aa17.71■□□□□ 0.42
SDCBP-204ENST00000447182 SBK2P0C263 348 aa17.71■□□□□ 0.42
SDCBP-204ENST00000447182 PRR23D2P0DMB1 279 aaPredicted RBP17.71■□□□□ 0.42
SDCBP-204ENST00000447182 PTNP21246 168 aa17.71■□□□□ 0.42
SDCBP-204ENST00000447182 HTR2AP28223 471 aa17.71■□□□□ 0.42
SDCBP-204ENST00000447182 AP2S1P53680 142 aaPredicted RBP17.71■□□□□ 0.42
SDCBP-204ENST00000447182 IRF4Q15306 451 aa17.71■□□□□ 0.42
SDCBP-204ENST00000447182 DUSP5Q16690 384 aa17.71■□□□□ 0.42
SDCBP-204ENST00000447182 GARNL3Q5VVW2 1013 aa17.71■□□□□ 0.42
SDCBP-204ENST00000447182 DMKNQ6E0U4 476 aaPredicted RBP17.71■□□□□ 0.42
SDCBP-204ENST00000447182 TEX261Q6UWH6 196 aa17.71■□□□□ 0.42
SDCBP-204ENST00000447182 TMPRSS11FQ6ZWK6 438 aa17.71■□□□□ 0.42
SDCBP-204ENST00000447182 MTSS1LQ765P7 747 aa17.71■□□□□ 0.42
SDCBP-204ENST00000447182 DTX3Q8N9I9 347 aa17.71■□□□□ 0.42
SDCBP-204ENST00000447182 PFN4Q8NHR9 129 aa17.71■□□□□ 0.42
SDCBP-204ENST00000447182 YIPF5Q969M3 257 aa17.71■□□□□ 0.42
SDCBP-204ENST00000447182 OR51J1Q9H342 316 aa17.71■□□□□ 0.42
SDCBP-204ENST00000447182 PHPT1Q9NRX4 125 aaPredicted RBP17.71■□□□□ 0.42
SDCBP-204ENST00000447182 C20orf141Q9NUB4 165 aa17.71■□□□□ 0.42
SDCBP-204ENST00000447182 CLDND1Q9NY35 253 aa17.71■□□□□ 0.42
SDCBP-204ENST00000447182 MGAT4AQ9UM21 535 aa17.71■□□□□ 0.42
SDCBP-204ENST00000447182 U3KQ87 197 aa17.71■□□□□ 0.42
SDCBP-204ENST00000447182 TEX13CA0A0J9YWL9 993 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 CENPVL1A0A0U1RR11 272 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 OR52A4PA6NMU1 304 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 SHOXO15266 292 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 HYAL3O43820 417 aaPredicted RBP17.7■□□□□ 0.42
SDCBP-204ENST00000447182 KCNJ13O60928 360 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 UBL3O95164 117 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 TIMP1P01033 207 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 PEPDP12955 493 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 IFI30P13284 250 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 FUT1P19526 365 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 SLC2A5P22732 501 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 UQCRC1P31930 480 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 SRP9P49458 86 aaKnown RBP17.7■□□□□ 0.42
SDCBP-204ENST00000447182 CLDN2P57739 230 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 SLC3A1Q07837 685 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 COL9A2Q14055 689 aaPredicted RBP17.7■□□□□ 0.42
SDCBP-204ENST00000447182 OR1Q1Q15612 314 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 RPE65Q16518 533 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 SLC25A35Q3KQZ1 300 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 LYPD4Q6UWN0 246 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 SLC44A3Q8N4M1 653 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 MS4A15Q8N5U1 240 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 C17orf47Q8NEP4 570 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 SLC2A12Q8TD20 617 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 HAVCR2Q8TDQ0 301 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 ADAMTS14Q8WXS8 1223 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 HGDQ93099 445 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 ZNF707Q96C28 371 aaPredicted RBP17.7■□□□□ 0.42
SDCBP-204ENST00000447182 ZNF350Q9GZX5 532 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 ERVMER34-1Q9H9K5 563 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 ADGRL4Q9HBW9 690 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 HAO2Q9NYQ3 351 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 AUP1Q9Y679 476 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 LAMA3Q16787 3333 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 DOCK9Q9BZ29 2069 aa17.7■□□□□ 0.42
SDCBP-204ENST00000447182 TRAV1-2A0A0B4J238 106 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 A0A1B0GVC2 190 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 A6NIN4 97 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 FMO6PO60774 539 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 SLC22A5O76082 557 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 TPOP07202 933 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 CCL5P13501 91 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 PRG2P13727 222 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 NRG3P56975 720 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 TNFRSF17Q02223 184 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 ZNF85Q03923 595 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 TOMM5Q8N4H5 51 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 POF1BQ8WVV4 589 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 C4orf36Q96KX1 117 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 C7orf50Q9BRJ6 194 aaKnown RBP17.69■□□□□ 0.42
SDCBP-204ENST00000447182 ZCCHC4Q9H5U6 513 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 SIGLEC7Q9Y286 467 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 TMEM5Q9Y2B1 443 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 SLC35A3Q9Y2D2 325 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 DBIP07108 87 aaKnown RBP17.69■□□□□ 0.42
SDCBP-204ENST00000447182 IL9P15248 144 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 RAB3BP20337 219 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 M6PRP20645 277 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 PITPNAQ00169 270 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 DEFB115Q30KQ5 88 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 ACSM3Q53FZ2 586 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 TJAP1Q5JTD0 557 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 THSD4Q6ZMP0 1018 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 VN1R4Q7Z5H5 301 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 ZNF619Q8N2I2 560 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 KCT2Q8NC54 265 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 ZNF275Q9NSD4 429 aaPredicted RBP17.69■□□□□ 0.42
SDCBP-204ENST00000447182 ABRACLQ9P1F3 81 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 THAP10Q9P2Z0 257 aaPredicted RBP17.69■□□□□ 0.42
SDCBP-204ENST00000447182 ZNF222Q9UK12 451 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 STON1Q9Y6Q2 735 aa17.69■□□□□ 0.42
SDCBP-204ENST00000447182 MYO7AQ13402 2215 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 RAF1P04049 648 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 RPS7P62081 194 aaKnown RBP17.68■□□□□ 0.42
SDCBP-204ENST00000447182 GPR68Q15743 365 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 MAPK14Q16539 360 aa17.68■□□□□ 0.42
SDCBP-204ENST00000447182 CMIPQ8IY22 773 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms