RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 SOX3P41225 446 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 ACAA2P42765 397 aaKnown RBP8.78□□□□□ -1
COL6A4P1-201ENST00000446690 PSMD7P51665 324 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 SLC37A1P57057 533 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 RPS3AP61247 264 aaKnown RBP8.78□□□□□ -1
COL6A4P1-201ENST00000446690 BIKQ13323 160 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 DSG2Q14126 1118 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 FGFBP1Q14512 234 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 MOGQ16653 247 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 CCDC92Q53HC0 331 aaPredicted RBP8.78□□□□□ -1
COL6A4P1-201ENST00000446690 PERM1Q5SV97 790 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 TMEM71Q6P5X7 295 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 ZNF613Q6PF04 617 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 ZNF574Q6ZN55 896 aaPredicted RBP8.78□□□□□ -1
COL6A4P1-201ENST00000446690 BMP8AQ7Z5Y6 402 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 PRR22Q8IZ63 422 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 RNF113BQ8IZP6 322 aaKnown RBP8.78□□□□□ -1
COL6A4P1-201ENST00000446690 EID2Q8N6I1 236 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 OR13C2Q8NGS9 318 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 SLC2A12Q8TD20 617 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 EDAQ92838 391 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 ZNF501Q96CX3 271 aaPredicted RBP8.78□□□□□ -1
COL6A4P1-201ENST00000446690 MVB12AQ96EY5 273 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 HS6ST2Q96MM7 605 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 OR1F2PQ96R84 312 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 POLR2J2Q9GZM3 115 aaKnown RBP8.78□□□□□ -1
COL6A4P1-201ENST00000446690 ENKD1Q9H0I2 346 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 DCSTAMPQ9H295 470 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 OR52D1Q9H346 318 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 GAREM1Q9H706 876 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 HHATLQ9HCP6 504 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 H2AFY2Q9P0M6 372 aaPredicted RBP8.78□□□□□ -1
COL6A4P1-201ENST00000446690 ZNF223Q9UK11 482 aaPredicted RBP8.78□□□□□ -1
COL6A4P1-201ENST00000446690 MMACHCQ9Y4U1 282 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 CDH10Q9Y6N8 788 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 MUC3AQ02505 3323 aa8.78□□□□□ -1
COL6A4P1-201ENST00000446690 TRAV27A0A087WT01 109 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 A0A0B4J2E0 115 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 A0A1B0GTQ1 180 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 A0A1B0GX12 115 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 A0A1B0GX78 115 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 FUOMA2VDF0 154 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 DSCR3O14972 297 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 SURF4O15260 269 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 PRODHO43272 600 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 GMFGO60234 142 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 CSO75390 466 aaKnown RBP8.77□□□□□ -1
COL6A4P1-201ENST00000446690 RFPL3O75679 317 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 RAB36O95755 333 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 MYL12AP19105 171 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 RORAP35398 523 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 ATP6V1E1P36543 226 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 ETV5P41161 510 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 MTNR1AP48039 350 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 ETV1P50549 477 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 RAB15P59190 212 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 CCL7P80098 99 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 ZXDAP98168 799 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 PRKCDQ05655 676 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 DBPQ10586 325 aaPredicted RBP8.77□□□□□ -1
COL6A4P1-201ENST00000446690 DOC2BQ14184 412 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 SPHARQ15513 63 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 ZNF141Q15928 474 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 PGGHGQ32M88 737 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 KLHL22Q53GT1 634 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 SLC25A30Q5SVS4 291 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 TMEM53Q6P2H8 277 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 ZNF550Q7Z398 422 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 PRSS42Q7Z5A4 293 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 SLC15A4Q8N697 577 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 OR7G1Q8NGA0 311 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 OR52L1Q8NGH7 329 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 SAP25Q8TEE9 199 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 IER2Q9BTL4 223 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 IFT27Q9BW83 186 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 MND1Q9BWT6 205 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 TRIM2Q9C040 744 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 NRSN2Q9GZP1 204 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 NXF5Q9H1B4 397 aaKnown RBP8.77□□□□□ -1
COL6A4P1-201ENST00000446690 UBQLN3Q9H347 655 aa8.77□□□□□ -1
COL6A4P1-201ENST00000446690 ZNF768Q9H5H4 540 aaKnown RBP8.77□□□□□ -1
COL6A4P1-201ENST00000446690 MEPEQ9NQ76 525 aaPredicted RBP8.77□□□□□ -1
COL6A4P1-201ENST00000446690 CEP192Q8TEP8 1941 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 CCDC163A0A0D9SF12 145 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 PNMA8CA0A1B0GUJ8 204 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 SERINC4A6NH21 518 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 J3QRK9 145 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 CCRL2O00421 344 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 ARHGAP33O14559 1287 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 CHP2O43745 196 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 ZGLP1P0C6A0 271 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 GALNSP34059 522 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 OPRL1P41146 370 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 SERPINB10P48595 397 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 CCR4P51679 360 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 EFNA3P52797 238 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 PSMD4P55036 377 aaKnown RBP8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 CDH11P55287 796 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 COPZ1P61923 177 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 CRYZQ08257 329 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms