RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	ZNF761	Q86XN6	746 aa	Predicted RBP	11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	KLHDC8A	Q8IYD2	350 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	FAM26E	Q8N5C1	309 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	ZNF527	Q8NB42	609 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	MORN4	Q8NDC4	146 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	NUP43	Q8NFH3	380 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	OR10G6	Q8NH81	332 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	PIGX	Q8TBF5	258 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	TRMT10A	Q8TBZ6	339 aa	Known RBP	11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	ADAMTS15	Q8TE58	950 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	MRGPRX3	Q96LB0	322 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	PDCD1LG2	Q9BQ51	273 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	SGPP1	Q9BX95	441 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	TES	Q9UGI8	421 aa	Known RBP	11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	MLX	Q9UH92	298 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	ENTPD4	Q9Y227	616 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	TEX13C	A0A0J9YWL9	993 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	TTLL8	A6PVC2	850 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	CDC123	O75794	336 aa	Predicted RBP	11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	SIX6	O95475	246 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	HLA-DPB1	P04440	258 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	ALPP	P05187	535 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	RPLP2	P05387	115 aa	Known RBP	11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	PPP3R1	P63098	170 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	ZNF155	Q12901	538 aa	Predicted RBP	11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	DEFB134	Q4QY38	66 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	CAMKMT	Q7Z624	323 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	POP5	Q969H6	163 aa	Known RBP	11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	RFT1	Q96AA3	541 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	RGMA	Q96B86	450 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	TIFA	Q96CG3	184 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	MSLNL	Q96KJ4	702 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	C4orf36	Q96KX1	117 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	OR7D2	Q96RA2	312 aa		11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	MN1	Q10571	1320 aa	Predicted RBP	11.68	□□□□□ -0.54
DDR1-238	ENST00000446312	PEX12	O00623	359 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	SGCE	O43556	437 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	ADAM11	O75078	769 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	AIFM1	O95831	613 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	PCSK2	P16519	638 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	ITGB7	P26010	798 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	ITGB8	P26012	769 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	BCL6	P41182	706 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	ADAM15	Q13444	863 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	ZNF124	Q15973	351 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	SGCA	Q16586	387 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	ZBTB37	Q5TC79	503 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	OR4C11	Q6IEV9	310 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	FAM111B	Q6SJ93	734 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	C17orf107	Q6ZR85	190 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	SIAH3	Q8IW03	269 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	FBXO15	Q8NCQ5	510 aa	Predicted RBP	11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	DNAJA4	Q8WW22	397 aa	Predicted RBP	11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	PTCHD1	Q96NR3	888 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	ARHGAP9	Q9BRR9	750 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	CLEC4M	Q9H2X3	399 aa	Predicted RBP	11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	COPZ2	Q9P299	210 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	KLHL42	Q9P2K6	505 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	FOXE1	O00358	373 aa	Predicted RBP	11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	RASGRP1	O95267	797 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	OLFM2	O95897	454 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	GABRA5	P31644	462 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	NUP62	P37198	522 aa	Predicted RBP	11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	SOX2	P48431	317 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	SEC13	P55735	322 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	TAS2R38	P59533	333 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	THSD4	Q6ZMP0	1018 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	RNF165	Q6ZSG1	346 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	SSX6	Q7RTT6	188 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	ACOT4	Q8N9L9	421 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	MARVELD3	Q96A59	401 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	OTUB2	Q96DC9	234 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	CACNG6	Q9BXT2	260 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	LGALS8	O00214	317 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	ZIC2	O95409	532 aa	Predicted RBP	11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	ECD	O95905	644 aa	Predicted RBP	11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	CLTB	P09497	229 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	ANKRD34C	P0C6C1	535 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	RPS5	P46782	204 aa	Known RBP	11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	SLC9A5	Q14940	896 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	DHCR24	Q15392	516 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	NDUFAF6	Q330K2	333 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	MPP7	Q5T2T1	576 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	LINGO2	Q7L985	606 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	STX12	Q86Y82	276 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	CDH26	Q8IXH8	852 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	ZNF687	Q8N1G0	1237 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	OR52H1	Q8NGJ2	320 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	OR2T35	Q8NGX2	323 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	OR5J2	Q8NH18	312 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	OR4K13	Q8NH42	304 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	NANP	Q8TBE9	248 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	CXorf40A	Q8TE69	158 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	MYEF2	Q9P2K5	600 aa	Known RBP	11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	PFDN2	Q9UHV9	154 aa		11.67	□□□□□ -0.54
DDR1-238	ENST00000446312	FRMPD3	Q5JV73	1810 aa		11.66	□□□□□ -0.54
DDR1-238	ENST00000446312	PLXNB3	Q9ULL4	1909 aa		11.66	□□□□□ -0.54
DDR1-238	ENST00000446312	SPINT1	O43278	529 aa		11.66	□□□□□ -0.54
DDR1-238	ENST00000446312	THY1	P04216	161 aa		11.66	□□□□□ -0.54
DDR1-238	ENST00000446312	SRPRA	P08240	638 aa	Known RBP	11.66	□□□□□ -0.54

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