RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 POLR3GO15318 223 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 ADAM12O43184 909 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 CHMP2AO43633 222 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 N4BP1O75113 896 aaKnown RBP3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 STK17BO94768 372 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 ECDO95905 644 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 ASNSP08243 561 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 PLEKP08567 350 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 KRT13P13646 458 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 AKT2P31751 481 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 SLC6A8P48029 635 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 HMGCS2P54868 508 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 RAG2P55895 527 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 TNNC1P63316 161 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 ZNF85Q03923 595 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 C2orf54Q08AI8 447 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 CRMP1Q14194 572 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 SLC15A2Q16348 729 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 CARTPTQ16568 116 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 ZSWIM7Q19AV6 140 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 CEP55Q53EZ4 464 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 LIPKQ5VXJ0 399 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 OR6B2Q6IFH4 312 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 C8orf74Q6P047 294 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 MFSD7Q6UXD7 560 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 DPY19L2P2Q6ZN68 376 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 MIER3Q7Z3K6 550 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 NAXDQ8IW45 347 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 SYCE1Q8N0S2 351 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 PYROXD2Q8N2H3 581 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 MMGT1Q8N4V1 131 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 LRRC17Q8N6Y2 441 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 FAM133AQ8N9E0 248 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 LEMD2Q8NC56 503 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 SLC13A3Q8WWT9 602 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 PHYHIPQ92561 330 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 RBM18Q96H35 190 aaKnown RBP3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 PIWIL1Q96J94 861 aaKnown RBP3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 TMEM237Q96Q45 408 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 FAM173AQ9BQD7 235 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 LXNQ9BS40 222 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 DEFB129Q9H1M3 183 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 ALG9Q9H6U8 611 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 VCPKMTQ9H867 229 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 AIPL1Q9NZN9 384 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 GCNT4Q9P109 453 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 CCPG1Q9ULG6 757 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 RBBP6Q7Z6E9 1792 aaKnown RBP3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 ADAMTS9Q9P2N4 1935 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 EP400Q96L91 3159 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 ASTN1O14525 1302 aa3.42□□□□□ -1.86
HMGB3P6-201ENST00000444896 IGLV3-22A0A075B6J6 115 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 ERICH4A6NGS2 130 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 EI24O14681 340 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 BUB1O43683 1085 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 PALMO75781 387 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 NOL4O94818 638 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 ALPPP05187 535 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 PROS1P07225 676 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 IVLP07476 585 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 ALPPL2P10696 532 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 UCHL3P15374 230 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 ARHGDIAP52565 204 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 SLC7A2P52569 658 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 IST1P53990 364 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 SNAP25P60880 206 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 SNRPFP62306 86 aaKnown RBP3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 TRA2BP62995 288 aaKnown RBP3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 NAAAQ02083 359 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 ZNF33BQ06732 778 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 PDK1Q15118 436 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 Q1RN00 199 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 SLC22A6Q4U2R8 563 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 AGKQ53H12 422 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 RAB12Q6IQ22 244 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 NIPA1Q7RTP0 329 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 TAF8Q7Z7C8 310 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 IFT20Q8IY31 132 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 ARL14Q8N4G2 192 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 SPATA4Q8NEY3 305 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 ZNF671Q8TAW3 534 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 ACER1Q8TDN7 264 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 DLX4Q92988 240 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 PKNOX2Q96KN3 472 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 RIT2Q99578 217 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 APOOQ9BUR5 198 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 TIPINQ9BVW5 301 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 FTHL17Q9BXU8 183 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 FAM124BQ9H5Z6 455 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 HOMER3Q9NSC5 361 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 CUTCQ9NTM9 273 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 MBD2Q9UBB5 411 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 MOSPD1Q9UJG1 213 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 TFR2Q9UP52 801 aa3.41□□□□□ -1.86
HMGB3P6-201ENST00000444896 CNTNAP1P78357 1384 aa3.4□□□□□ -1.86
HMGB3P6-201ENST00000444896 MYH11P35749 1972 aa3.4□□□□□ -1.86
HMGB3P6-201ENST00000444896 ABCA7Q8IZY2 2146 aa3.4□□□□□ -1.86
HMGB3P6-201ENST00000444896 NPIPA5A0A0B4J1W7 369 aa3.4□□□□□ -1.87
HMGB3P6-201ENST00000444896 CFAP73A6NFT4 308 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms