RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 EIF3MQ7L2H7 374 aaKnown RBP16.77■□□□□ 0.28
CCDC188-202ENST00000444532 ZNF619Q8N2I2 560 aa16.77■□□□□ 0.28
CCDC188-202ENST00000444532 OR9I1Q8NGQ6 314 aa16.77■□□□□ 0.28
CCDC188-202ENST00000444532 OR5W2Q8NH69 310 aa16.77■□□□□ 0.28
CCDC188-202ENST00000444532 POC1BQ8TC44 478 aa16.77■□□□□ 0.28
CCDC188-202ENST00000444532 ZFP90Q8TF47 636 aa16.77■□□□□ 0.28
CCDC188-202ENST00000444532 STON2Q8WXE9 905 aa16.77■□□□□ 0.28
CCDC188-202ENST00000444532 RNASE6Q93091 150 aaKnown RBP16.77■□□□□ 0.28
CCDC188-202ENST00000444532 ARSGQ96EG1 525 aa16.77■□□□□ 0.28
CCDC188-202ENST00000444532 TRNT1Q96Q11 434 aaKnown RBP16.77■□□□□ 0.28
CCDC188-202ENST00000444532 NPAS1Q99742 590 aa16.77■□□□□ 0.28
CCDC188-202ENST00000444532 KLHDC3Q9BQ90 382 aa16.77■□□□□ 0.28
CCDC188-202ENST00000444532 PINK1Q9BXM7 581 aa16.77■□□□□ 0.28
CCDC188-202ENST00000444532 LAT2Q9GZY6 243 aa16.77■□□□□ 0.28
CCDC188-202ENST00000444532 TMEM45AQ9NWC5 275 aa16.77■□□□□ 0.28
CCDC188-202ENST00000444532 PAQR5Q9NXK6 330 aaPredicted RBP16.77■□□□□ 0.28
CCDC188-202ENST00000444532 JKAMPQ9P055 326 aa16.77■□□□□ 0.28
CCDC188-202ENST00000444532 KCNN3Q9UGI6 736 aa16.77■□□□□ 0.28
CCDC188-202ENST00000444532 GPC6Q9Y625 555 aaPredicted RBP16.77■□□□□ 0.28
CCDC188-202ENST00000444532 NOTCH2Q04721 2471 aa16.77■□□□□ 0.27
CCDC188-202ENST00000444532 CSTAP01040 98 aa16.76■□□□□ 0.27
CCDC188-202ENST00000444532 C1QCP02747 245 aa16.76■□□□□ 0.27
CCDC188-202ENST00000444532 ELK4P28324 431 aa16.76■□□□□ 0.27
CCDC188-202ENST00000444532 UQCRC1P31930 480 aa16.76■□□□□ 0.27
CCDC188-202ENST00000444532 RNF144AP50876 292 aaPredicted RBP16.76■□□□□ 0.27
CCDC188-202ENST00000444532 AGFG1P52594 562 aaKnown RBP16.76■□□□□ 0.27
CCDC188-202ENST00000444532 HPCAP84074 193 aa16.76■□□□□ 0.27
CCDC188-202ENST00000444532 CBFBQ13951 182 aa16.76■□□□□ 0.27
CCDC188-202ENST00000444532 SGCBQ16585 318 aa16.76■□□□□ 0.27
CCDC188-202ENST00000444532 OLIG3Q7RTU3 272 aa16.76■□□□□ 0.27
CCDC188-202ENST00000444532 GCNT2Q8N0V5 402 aa16.76■□□□□ 0.27
CCDC188-202ENST00000444532 PMM1Q92871 262 aa16.76■□□□□ 0.27
CCDC188-202ENST00000444532 VPS33AQ96AX1 596 aa16.76■□□□□ 0.27
CCDC188-202ENST00000444532 PIGMQ9H3S5 423 aa16.76■□□□□ 0.27
CCDC188-202ENST00000444532 SLC6A13Q9NSD5 602 aa16.76■□□□□ 0.27
CCDC188-202ENST00000444532 SLC35A3Q9Y2D2 325 aa16.76■□□□□ 0.27
CCDC188-202ENST00000444532 L3MBTL1Q9Y468 752 aa16.76■□□□□ 0.27
CCDC188-202ENST00000444532 PRAMEF27A3QJZ7 478 aa16.75■□□□□ 0.27
CCDC188-202ENST00000444532 EIF1AYO14602 144 aaKnown RBP16.75■□□□□ 0.27
CCDC188-202ENST00000444532 ADAMDEC1O15204 470 aa16.75■□□□□ 0.27
CCDC188-202ENST00000444532 DNAJA2O60884 412 aa16.75■□□□□ 0.27
CCDC188-202ENST00000444532 H6PDO95479 791 aa16.75■□□□□ 0.27
CCDC188-202ENST00000444532 SKP2Q13309 424 aa16.75■□□□□ 0.27
CCDC188-202ENST00000444532 FGFBP1Q14512 234 aa16.75■□□□□ 0.27
CCDC188-202ENST00000444532 PON3Q15166 354 aa16.75■□□□□ 0.27
CCDC188-202ENST00000444532 MAPK14Q16539 360 aa16.75■□□□□ 0.27
CCDC188-202ENST00000444532 SYPL1Q16563 259 aa16.75■□□□□ 0.27
CCDC188-202ENST00000444532 NDUFAF6Q330K2 333 aa16.75■□□□□ 0.27
CCDC188-202ENST00000444532 SLC25A53Q5H9E4 307 aa16.75■□□□□ 0.27
CCDC188-202ENST00000444532 COX20Q5RI15 118 aa16.75■□□□□ 0.27
CCDC188-202ENST00000444532 PDSS1Q5T2R2 415 aa16.75■□□□□ 0.27
CCDC188-202ENST00000444532 LRRC74BQ6ZQY2 392 aa16.75■□□□□ 0.27
CCDC188-202ENST00000444532 ESPNLQ6ZVH7 1005 aa16.75■□□□□ 0.27
CCDC188-202ENST00000444532 LILRA2Q8N149 483 aa16.75■□□□□ 0.27
CCDC188-202ENST00000444532 TMCO5AQ8N6Q1 288 aa16.75■□□□□ 0.27
CCDC188-202ENST00000444532 RFWD2Q8NHY2 731 aa16.75■□□□□ 0.27
CCDC188-202ENST00000444532 PNPT1Q8TCS8 783 aaKnown RBP16.75■□□□□ 0.27
CCDC188-202ENST00000444532 FIG4Q92562 907 aa16.75■□□□□ 0.27
CCDC188-202ENST00000444532 GTF2H4Q92759 462 aa16.75■□□□□ 0.27
CCDC188-202ENST00000444532 ZNF845Q96IR2 970 aaPredicted RBP16.75■□□□□ 0.27
CCDC188-202ENST00000444532 ADGRG7Q96K78 797 aa16.75■□□□□ 0.27
CCDC188-202ENST00000444532 MRGPRX4Q96LA9 322 aa16.75■□□□□ 0.27
CCDC188-202ENST00000444532 MTHFD2LQ9H903 347 aaPredicted RBP16.75■□□□□ 0.27
CCDC188-202ENST00000444532 TPT1P8Q9HAU6 139 aa16.75■□□□□ 0.27
CCDC188-202ENST00000444532 HEATR5AQ86XA9 2040 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 LRBAP50851 2863 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 CENPVL1A0A0U1RR11 272 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 A0A1W2PNV4 684 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 EEF1E1-BLOC1S5C9J1V9 151 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 EEF1E1O43324 174 aaKnown RBP16.74■□□□□ 0.27
CCDC188-202ENST00000444532 EDF1O60869 148 aaKnown RBP16.74■□□□□ 0.27
CCDC188-202ENST00000444532 FCGR2AP12318 317 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 PRKCAP17252 672 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 EIF1AXP47813 144 aaKnown RBP16.74■□□□□ 0.27
CCDC188-202ENST00000444532 ATP4BP51164 291 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 MVDP53602 400 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 CHRNEQ04844 493 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 FOXF1Q12946 379 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 TOMM34Q15785 309 aaPredicted RBP16.74■□□□□ 0.27
CCDC188-202ENST00000444532 CTU2Q2VPK5 515 aaKnown RBP16.74■□□□□ 0.27
CCDC188-202ENST00000444532 C6orf10Q5SRN2 563 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 BLOC1S3Q6QNY0 202 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 DNAJC14Q6Y2X3 702 aaPredicted RBP16.74■□□□□ 0.27
CCDC188-202ENST00000444532 KIF18BQ86Y91 864 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 FUNDC1Q8IVP5 155 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 ANKFN1Q8N957 763 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 FAM71CQ8NEG0 241 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 OR10D3Q8NH80 312 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 FBXO27Q8NI29 283 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 FNDC9Q8TBE3 224 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 ZG16BQ96DA0 208 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 SIKE1Q9BRV8 207 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 THUMPD3Q9BV44 507 aaKnown RBP16.74■□□□□ 0.27
CCDC188-202ENST00000444532 SLC38A1Q9H2H9 487 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 RNF122Q9H9V4 155 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 MCCC2Q9HCC0 563 aa16.74■□□□□ 0.27
CCDC188-202ENST00000444532 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.74■□□□□ 0.27
CCDC188-202ENST00000444532 THUMPD1Q9NXG2 353 aaKnown RBP16.74■□□□□ 0.27
CCDC188-202ENST00000444532 GJE1A6NN92 205 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms