RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 BHLHB9Q6PI77 547 aa18.79■□□□□ 0.6
VSX1-206ENST00000444511 OR5AK3PQ8NH89 298 aa18.79■□□□□ 0.6
VSX1-206ENST00000444511 FBXO27Q8NI29 283 aa18.79■□□□□ 0.6
VSX1-206ENST00000444511 PPP1R14CQ8TAE6 165 aa18.79■□□□□ 0.6
VSX1-206ENST00000444511 CPNE4Q96A23 557 aaPredicted RBP18.79■□□□□ 0.6
VSX1-206ENST00000444511 ACTR6Q9GZN1 396 aa18.79■□□□□ 0.6
VSX1-206ENST00000444511 ICAM5Q9UMF0 924 aa18.79■□□□□ 0.6
VSX1-206ENST00000444511 ACTL7BQ9Y614 415 aa18.79■□□□□ 0.6
VSX1-206ENST00000444511 GPC6Q9Y625 555 aaPredicted RBP18.79■□□□□ 0.6
VSX1-206ENST00000444511 G6PDP11413 515 aa18.78■□□□□ 0.6
VSX1-206ENST00000444511 CREB1P16220 341 aa18.78■□□□□ 0.6
VSX1-206ENST00000444511 LTBQ06643 244 aa18.78■□□□□ 0.6
VSX1-206ENST00000444511 RNPS1Q15287 305 aaKnown RBP18.78■□□□□ 0.6
VSX1-206ENST00000444511 PGS1Q32NB8 556 aa18.78■□□□□ 0.6
VSX1-206ENST00000444511 TMEM201Q5SNT2 666 aa18.78■□□□□ 0.6
VSX1-206ENST00000444511 CLEC9AQ6UXN8 241 aa18.78■□□□□ 0.6
VSX1-206ENST00000444511 Q71RC1 249 aaPredicted RBP18.78■□□□□ 0.6
VSX1-206ENST00000444511 WFDC8Q8IUA0 241 aa18.78■□□□□ 0.6
VSX1-206ENST00000444511 NUDCD3Q8IVD9 361 aa18.78■□□□□ 0.6
VSX1-206ENST00000444511 RIMKLAQ8IXN7 391 aa18.78■□□□□ 0.6
VSX1-206ENST00000444511 RNF128Q8TEB7 428 aa18.78■□□□□ 0.6
VSX1-206ENST00000444511 PERPQ96FX8 193 aa18.78■□□□□ 0.6
VSX1-206ENST00000444511 OR7D2Q96RA2 312 aa18.78■□□□□ 0.6
VSX1-206ENST00000444511 GPR52Q9Y2T5 361 aa18.78■□□□□ 0.6
VSX1-206ENST00000444511 DTNAQ9Y4J8 743 aa18.78■□□□□ 0.6
VSX1-206ENST00000444511 KLF4O43474 513 aa18.77■□□□□ 0.6
VSX1-206ENST00000444511 NR1H2P55055 460 aa18.77■□□□□ 0.6
VSX1-206ENST00000444511 HBA1P69905 142 aa18.77■□□□□ 0.6
VSX1-206ENST00000444511 NDUFAF6Q330K2 333 aa18.77■□□□□ 0.6
VSX1-206ENST00000444511 TMEM176BQ3YBM2 270 aaPredicted RBP18.77■□□□□ 0.6
VSX1-206ENST00000444511 EMBQ6PCB8 327 aa18.77■□□□□ 0.6
VSX1-206ENST00000444511 TMCO5AQ8N6Q1 288 aa18.77■□□□□ 0.6
VSX1-206ENST00000444511 ATP6V1C2Q8NEY4 427 aa18.77■□□□□ 0.6
VSX1-206ENST00000444511 OR5D16Q8NGK9 328 aa18.77■□□□□ 0.6
VSX1-206ENST00000444511 RFWD2Q8NHY2 731 aa18.77■□□□□ 0.6
VSX1-206ENST00000444511 GPR119Q8TDV5 335 aa18.77■□□□□ 0.6
VSX1-206ENST00000444511 AENQ8WTP8 325 aaKnown RBP18.77■□□□□ 0.6
VSX1-206ENST00000444511 ABHD3Q8WU67 409 aa18.77■□□□□ 0.6
VSX1-206ENST00000444511 SRXN1Q9BYN0 137 aa18.77■□□□□ 0.6
VSX1-206ENST00000444511 NOP53Q9NZM5 478 aaKnown RBP18.77■□□□□ 0.6
VSX1-206ENST00000444511 FAM171A2A8MVW0 826 aa18.76■□□□□ 0.59
VSX1-206ENST00000444511 NPIPB9F8W1W9 429 aa18.76■□□□□ 0.59
VSX1-206ENST00000444511 TYROBPO43914 113 aa18.76■□□□□ 0.59
VSX1-206ENST00000444511 EFNA2O43921 213 aa18.76■□□□□ 0.59
VSX1-206ENST00000444511 PRKCAP17252 672 aa18.76■□□□□ 0.59
VSX1-206ENST00000444511 PSMB1P20618 241 aaKnown RBP18.76■□□□□ 0.59
VSX1-206ENST00000444511 ETV4P43268 484 aa18.76■□□□□ 0.59
VSX1-206ENST00000444511 CCR4P51679 360 aa18.76■□□□□ 0.59
VSX1-206ENST00000444511 EMX2Q04743 252 aa18.76■□□□□ 0.59
VSX1-206ENST00000444511 TOMM34Q15785 309 aaPredicted RBP18.76■□□□□ 0.59
VSX1-206ENST00000444511 PRSS57Q6UWY2 283 aa18.76■□□□□ 0.59
VSX1-206ENST00000444511 ZNF704Q6ZNC4 412 aaPredicted RBP18.76■□□□□ 0.59
VSX1-206ENST00000444511 PLEKHM3Q6ZWE6 761 aa18.76■□□□□ 0.59
VSX1-206ENST00000444511 YTHDF3Q7Z739 585 aaKnown RBP18.76■□□□□ 0.59
VSX1-206ENST00000444511 TOR1AIP2Q8NFQ8 470 aa18.76■□□□□ 0.59
VSX1-206ENST00000444511 MRGPRX4Q96LA9 322 aa18.76■□□□□ 0.59
VSX1-206ENST00000444511 Q96MF0 132 aa18.76■□□□□ 0.59
VSX1-206ENST00000444511 SDF2Q99470 211 aa18.76■□□□□ 0.59
VSX1-206ENST00000444511 OR10A4Q9H209 315 aa18.76■□□□□ 0.59
VSX1-206ENST00000444511 KLHL13Q9P2N7 655 aa18.76■□□□□ 0.59
VSX1-206ENST00000444511 NIPBLQ6KC79 2804 aaeCLIP18.76■□□□□ 0.59
VSX1-206ENST00000444511 DUXAA6NLW8 204 aa18.75■□□□□ 0.59
VSX1-206ENST00000444511 ZNF264O43296 627 aa18.75■□□□□ 0.59
VSX1-206ENST00000444511 EIF4E2O60573 245 aaKnown RBP18.75■□□□□ 0.59
VSX1-206ENST00000444511 PRKD3O94806 890 aa18.75■□□□□ 0.59
VSX1-206ENST00000444511 UBL4AP11441 157 aa18.75■□□□□ 0.59
VSX1-206ENST00000444511 SLC7A1P30825 629 aa18.75■□□□□ 0.59
VSX1-206ENST00000444511 CLDN8P56748 225 aa18.75■□□□□ 0.59
VSX1-206ENST00000444511 C21orf58P58505 322 aa18.75■□□□□ 0.59
VSX1-206ENST00000444511 RPS26P62854 115 aaKnown RBP18.75■□□□□ 0.59
VSX1-206ENST00000444511 PDCD2Q16342 344 aaPredicted RBP18.75■□□□□ 0.59
VSX1-206ENST00000444511 ALKBH2Q6NS38 261 aa18.75■□□□□ 0.59
VSX1-206ENST00000444511 FCRLAQ7L513 359 aa18.75■□□□□ 0.59
VSX1-206ENST00000444511 STEAP2Q8NFT2 490 aa18.75■□□□□ 0.59
VSX1-206ENST00000444511 OR5W2Q8NH69 310 aa18.75■□□□□ 0.59
VSX1-206ENST00000444511 ZFP90Q8TF47 636 aa18.75■□□□□ 0.59
VSX1-206ENST00000444511 PLPPR2Q96GM1 343 aa18.75■□□□□ 0.59
VSX1-206ENST00000444511 PKNOX2Q96KN3 472 aa18.75■□□□□ 0.59
VSX1-206ENST00000444511 PPP1R36Q96LQ0 422 aa18.75■□□□□ 0.59
VSX1-206ENST00000444511 ASIC5Q9NY37 505 aa18.75■□□□□ 0.59
VSX1-206ENST00000444511 H7C1Q1 480 aa18.74■□□□□ 0.59
VSX1-206ENST00000444511 AK1P00568 194 aa18.74■□□□□ 0.59
VSX1-206ENST00000444511 NID1P14543 1247 aa18.74■□□□□ 0.59
VSX1-206ENST00000444511 MATN1P21941 496 aa18.74■□□□□ 0.59
VSX1-206ENST00000444511 SELENBP1Q13228 472 aa18.74■□□□□ 0.59
VSX1-206ENST00000444511 CBFBQ13951 182 aa18.74■□□□□ 0.59
VSX1-206ENST00000444511 GPR68Q15743 365 aa18.74■□□□□ 0.59
VSX1-206ENST00000444511 SMU1Q2TAY7 513 aa18.74■□□□□ 0.59
VSX1-206ENST00000444511 PDZK1Q5T2W1 519 aa18.74■□□□□ 0.59
VSX1-206ENST00000444511 OR4F3Q6IEY1 312 aa18.74■□□□□ 0.59
VSX1-206ENST00000444511 NUFIP2Q7Z417 695 aaKnown RBP18.74■□□□□ 0.59
VSX1-206ENST00000444511 C6orf120Q7Z4R8 191 aa18.74■□□□□ 0.59
VSX1-206ENST00000444511 TUSC5Q8IXB3 177 aa18.74■□□□□ 0.59
VSX1-206ENST00000444511 CLECL1Q8IZS7 167 aa18.74■□□□□ 0.59
VSX1-206ENST00000444511 ARL8AQ96BM9 186 aa18.74■□□□□ 0.59
VSX1-206ENST00000444511 ARSGQ96EG1 525 aa18.74■□□□□ 0.59
VSX1-206ENST00000444511 COX4I2Q96KJ9 171 aa18.74■□□□□ 0.59
VSX1-206ENST00000444511 SLC35G5Q96KT7 338 aa18.74■□□□□ 0.59
VSX1-206ENST00000444511 ZIM3Q96PE6 472 aa18.74■□□□□ 0.59
VSX1-206ENST00000444511 TACO1Q9BSH4 297 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms