RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 CD8BP10966 210 aa16.91■□□□□ 0.3
ATPAF2-201ENST00000444058 UBL4AP11441 157 aa16.91■□□□□ 0.3
ATPAF2-201ENST00000444058 IL12AP29459 219 aa16.91■□□□□ 0.3
ATPAF2-201ENST00000444058 CHI3L1P36222 383 aaPredicted RBP16.91■□□□□ 0.3
ATPAF2-201ENST00000444058 MAGEA8P43361 318 aa16.91■□□□□ 0.3
ATPAF2-201ENST00000444058 EIF1AXP47813 144 aaKnown RBP16.91■□□□□ 0.3
ATPAF2-201ENST00000444058 KHKP50053 298 aa16.91■□□□□ 0.3
ATPAF2-201ENST00000444058 GPR68Q15743 365 aa16.91■□□□□ 0.3
ATPAF2-201ENST00000444058 PDSS1Q5T2R2 415 aa16.91■□□□□ 0.3
ATPAF2-201ENST00000444058 PDZK1Q5T2W1 519 aa16.91■□□□□ 0.3
ATPAF2-201ENST00000444058 LUZP2Q86TE4 346 aa16.91■□□□□ 0.3
ATPAF2-201ENST00000444058 LILRA2Q8N149 483 aa16.91■□□□□ 0.3
ATPAF2-201ENST00000444058 OR5W2Q8NH69 310 aa16.91■□□□□ 0.3
ATPAF2-201ENST00000444058 OR2V1Q8NHB1 315 aa16.91■□□□□ 0.3
ATPAF2-201ENST00000444058 GPR119Q8TDV5 335 aa16.91■□□□□ 0.3
ATPAF2-201ENST00000444058 XAGE5Q8WWM1 108 aa16.91■□□□□ 0.3
ATPAF2-201ENST00000444058 MRGPRX4Q96LA9 322 aa16.91■□□□□ 0.3
ATPAF2-201ENST00000444058 DACH2Q96NX9 599 aa16.91■□□□□ 0.3
ATPAF2-201ENST00000444058 NPAS1Q99742 590 aa16.91■□□□□ 0.3
ATPAF2-201ENST00000444058 SDR39U1Q9NRG7 319 aaPredicted RBP16.91■□□□□ 0.3
ATPAF2-201ENST00000444058 GLRX2Q9NS18 164 aa16.91■□□□□ 0.3
ATPAF2-201ENST00000444058 KCNE5Q9UJ90 142 aa16.91■□□□□ 0.3
ATPAF2-201ENST00000444058 MCTS1Q9ULC4 181 aaKnown RBP16.91■□□□□ 0.3
ATPAF2-201ENST00000444058 ANKRD17O75179 2603 aaKnown RBP16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 CCDC154A6NI56 674 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 GJE1A6NN92 205 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 OIP5O43482 229 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 KIAA0513O60268 411 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 SLC22A3O75751 556 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 AQP8O94778 261 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 NTN1O95631 604 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 NUDT14O95848 222 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 CGAP01215 116 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 OR12D1P0DN82 309 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 PRKCAP17252 672 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 ANXA11P50995 505 aaKnown RBP16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 NME5P56597 212 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 SLC9B1Q4ZJI4 515 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 SLC25A53Q5H9E4 307 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 NXNQ6DKJ4 435 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 FAM214BQ7L5A3 538 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 MAVSQ7Z434 540 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 ZNF614Q8N883 585 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 CNEP1R1Q8N9A8 125 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 ROPN1LQ96C74 230 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 GMPPAQ96IJ6 420 aaPredicted RBP16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 KLHL15Q96M94 604 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 KLHDC3Q9BQ90 382 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 POLDIP3Q9BY77 421 aaKnown RBP16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 LAT2Q9GZY6 243 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 DNAJB12Q9NXW2 375 aaKnown RBP16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 ELOVL5Q9NYP7 299 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 ZIM2Q9NZV7 527 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 MKLN1Q9UL63 735 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 LIPT1Q9Y234 373 aa16.9■□□□□ 0.3
ATPAF2-201ENST00000444058 A0A0J9YW62 118 aa16.89■□□□□ 0.29
ATPAF2-201ENST00000444058 UBDO15205 165 aa16.89■□□□□ 0.29
ATPAF2-201ENST00000444058 TGDSO95455 350 aa16.89■□□□□ 0.29
ATPAF2-201ENST00000444058 IL11P20809 199 aa16.89■□□□□ 0.29
ATPAF2-201ENST00000444058 FOXF1Q12946 379 aa16.89■□□□□ 0.29
ATPAF2-201ENST00000444058 SKP2Q13309 424 aa16.89■□□□□ 0.29
ATPAF2-201ENST00000444058 CBFBQ13951 182 aa16.89■□□□□ 0.29
ATPAF2-201ENST00000444058 TYW3Q6IPR3 259 aaKnown RBP16.89■□□□□ 0.29
ATPAF2-201ENST00000444058 TNFAIP8L2Q6P589 184 aaPredicted RBP16.89■□□□□ 0.29
ATPAF2-201ENST00000444058 VWA1Q6PCB0 445 aa16.89■□□□□ 0.29
ATPAF2-201ENST00000444058 MSANTD1Q6ZTZ1 278 aa16.89■□□□□ 0.29
ATPAF2-201ENST00000444058 EIF3MQ7L2H7 374 aaKnown RBP16.89■□□□□ 0.29
ATPAF2-201ENST00000444058 BTLAQ7Z6A9 289 aa16.89■□□□□ 0.29
ATPAF2-201ENST00000444058 FBXO27Q8NI29 283 aa16.89■□□□□ 0.29
ATPAF2-201ENST00000444058 PMM1Q92871 262 aa16.89■□□□□ 0.29
ATPAF2-201ENST00000444058 RAB8BQ92930 207 aa16.89■□□□□ 0.29
ATPAF2-201ENST00000444058 PRRG4Q9BZD6 226 aa16.89■□□□□ 0.29
ATPAF2-201ENST00000444058 CLEC4MQ9H2X3 399 aaPredicted RBP16.89■□□□□ 0.29
ATPAF2-201ENST00000444058 VIPAS39Q9H9C1 493 aa16.89■□□□□ 0.29
ATPAF2-201ENST00000444058 TIGARQ9NQ88 270 aa16.89■□□□□ 0.29
ATPAF2-201ENST00000444058 WDR45Q9Y484 360 aa16.89■□□□□ 0.29
ATPAF2-201ENST00000444058 HMGN4O00479 90 aa16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 SMNDC1O75940 238 aaKnown RBP eCLIP16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 SYNGR4O95473 234 aa16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 CSTAP01040 98 aa16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 PABPC4LP0CB38 370 aaKnown RBP16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 CASP9P55211 416 aa16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 CARD18P57730 90 aa16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 HBMQ6B0K9 141 aa16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 GTF2IRD2BQ6EKJ0 949 aa16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 EPGNQ6UW88 154 aa16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 ZNF621Q6ZSS3 439 aa16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 HDXQ7Z353 690 aa16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 GTF2IRD2Q86UP8 949 aa16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 RNF130Q86XS8 419 aa16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 ZNF619Q8N2I2 560 aa16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 FAM71CQ8NEG0 241 aa16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 LINC01560Q8TB33 94 aa16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 ST8SIA1Q92185 356 aa16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 TRNT1Q96Q11 434 aaKnown RBP16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 OR52B2Q96RD2 323 aa16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 GPATCH1Q9BRR8 931 aaKnown RBP16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 SLC39A3Q9BRY0 314 aa16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 INPP5KQ9BT40 448 aa16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 TMEM185BQ9H7F4 350 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms