RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 P2RY6Q15077 328 aa6.97□□□□□ -1.29
CD44-211ENST00000442151 POU4F3Q15319 338 aa6.97□□□□□ -1.29
CD44-211ENST00000442151 PRSS53Q2L4Q9 553 aa6.97□□□□□ -1.29
CD44-211ENST00000442151 EXOC3L2Q2M3D2 409 aa6.97□□□□□ -1.29
CD44-211ENST00000442151 PLPPR5Q32ZL2 321 aa6.97□□□□□ -1.29
CD44-211ENST00000442151 KLHL26Q53HC5 615 aa6.97□□□□□ -1.29
CD44-211ENST00000442151 C6orf136Q5SQH8 315 aa6.97□□□□□ -1.29
CD44-211ENST00000442151 IL23RQ5VWK5 629 aa6.97□□□□□ -1.29
CD44-211ENST00000442151 ANKRD26P1Q6NSI1 321 aa6.97□□□□□ -1.29
CD44-211ENST00000442151 SLC16A11Q8NCK7 471 aa6.97□□□□□ -1.29
CD44-211ENST00000442151 TCP10LQ8TDR4 215 aa6.97□□□□□ -1.29
CD44-211ENST00000442151 GIMAP5Q96F15 307 aa6.97□□□□□ -1.29
CD44-211ENST00000442151 TRMT61AQ96FX7 289 aaKnown RBP6.97□□□□□ -1.29
CD44-211ENST00000442151 RNF145Q96MT1 663 aa6.97□□□□□ -1.29
CD44-211ENST00000442151 DUSP26Q9BV47 211 aa6.97□□□□□ -1.29
CD44-211ENST00000442151 TMEM109Q9BVC6 243 aa6.97□□□□□ -1.29
CD44-211ENST00000442151 NMUR2Q9GZQ4 415 aa6.97□□□□□ -1.29
CD44-211ENST00000442151 ESRP2Q9H6T0 727 aaKnown RBP6.97□□□□□ -1.29
CD44-211ENST00000442151 UBTD1Q9HAC8 227 aa6.97□□□□□ -1.29
CD44-211ENST00000442151 ASIC5Q9NY37 505 aa6.97□□□□□ -1.29
CD44-211ENST00000442151 KLHL9Q9P2J3 617 aa6.97□□□□□ -1.29
CD44-211ENST00000442151 CELSR1Q9NYQ6 3014 aa6.96□□□□□ -1.29
CD44-211ENST00000442151 ADGRG4Q8IZF6 3080 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 PDZD2O15018 2839 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 TNFSF11O14788 317 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 ZNF264O43296 627 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 NME6O75414 186 aaPredicted RBP6.96□□□□□ -1.3
CD44-211ENST00000442151 CNOT4O95628 575 aaKnown RBP6.96□□□□□ -1.3
CD44-211ENST00000442151 IGKV1D-16P01601 117 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 BPGMP07738 259 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 YES1P07947 543 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 INHBBP09529 407 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 PGCP20142 388 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 MATN1P21941 496 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 IL32P24001 234 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 CLK1P49759 484 aaKnown RBP6.96□□□□□ -1.3
CD44-211ENST00000442151 CLNS1AP54105 237 aaKnown RBP6.96□□□□□ -1.3
CD44-211ENST00000442151 RAC3P60763 192 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 CSNK2A1P68400 391 aaPredicted RBP6.96□□□□□ -1.3
CD44-211ENST00000442151 GUSBP1Q15486 140 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 ETFDHQ16134 617 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 DPY19L1Q2PZI1 675 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 PGS1Q32NB8 556 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 UGT3A2Q3SY77 523 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 DCST2Q5T1A1 773 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 GGNQ86UU5 652 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 P2RY8Q86VZ1 359 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 TRIML2Q8N7C3 387 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 OR5M1Q8NGP8 315 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 OR5W2Q8NH69 310 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 SLC25A43Q8WUT9 341 aaPredicted RBP6.96□□□□□ -1.3
CD44-211ENST00000442151 ST8SIA1Q92185 356 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 PMM1Q92871 262 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 ARSGQ96EG1 525 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 SH3YL1Q96HL8 342 aaPredicted RBP6.96□□□□□ -1.3
CD44-211ENST00000442151 DPY30Q9C005 99 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 LAT2Q9GZY6 243 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 TUBB1Q9H4B7 451 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 SSU72Q9NP77 194 aaKnown RBP6.96□□□□□ -1.3
CD44-211ENST00000442151 FLRT3Q9NZU0 649 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 C6orf203Q9P0P8 240 aaPredicted RBP6.96□□□□□ -1.3
CD44-211ENST00000442151 SLC35A3Q9Y2D2 325 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 CCDC168Q8NDH2 2452 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 ITPR3Q14573 2671 aa6.96□□□□□ -1.3
CD44-211ENST00000442151 FBN2P35556 2912 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 DEFB108AA8MXU0 73 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 RNASET2O00584 256 aaKnown RBP6.95□□□□□ -1.3
CD44-211ENST00000442151 TM9SF1O15321 606 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 RGS16O15492 202 aaPredicted RBP6.95□□□□□ -1.3
CD44-211ENST00000442151 GMFGO60234 142 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 LAMP1P11279 417 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 UBL4AP11441 157 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 UQCRBP14927 111 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 ENPP1P22413 925 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 PAX7P23759 505 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 SOAT1P35610 550 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 MAGEA8P43361 318 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 SLC6A8P48029 635 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 MAP2K6P52564 334 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 HPCAP84074 193 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 ZSWIM7Q19AV6 140 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 ARHGAP11BQ3KRB8 267 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 TMEM176BQ3YBM2 270 aaPredicted RBP6.95□□□□□ -1.3
CD44-211ENST00000442151 ZNF385BQ569K4 471 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 XKR7Q5GH72 579 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 SLC25A53Q5H9E4 307 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 EXOSC6Q5RKV6 272 aaKnown RBP6.95□□□□□ -1.3
CD44-211ENST00000442151 CLEC9AQ6UXN8 241 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 APOOLQ6UXV4 268 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 EIF3MQ7L2H7 374 aaKnown RBP6.95□□□□□ -1.3
CD44-211ENST00000442151 C16orf62Q7Z3J2 963 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 C6orf120Q7Z4R8 191 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 GALNT10Q86SR1 603 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 GSPT2Q8IYD1 628 aaKnown RBP6.95□□□□□ -1.3
CD44-211ENST00000442151 TMCO5AQ8N6Q1 288 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 ZNF611Q8N823 705 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 ZNF614Q8N883 585 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 GATSQ8NAP1 163 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 OR7A2PQ8NGA2 310 aa6.95□□□□□ -1.3
CD44-211ENST00000442151 OR2T11Q8NH01 316 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms