RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 HDAC3O15379 428 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 CXCL13O43927 109 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 DNAJA2O60884 412 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 SMNDC1O75940 238 aaKnown RBP eCLIP16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 NTN1O95631 604 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 CPSF4O95639 269 aaKnown RBP16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 C1QCP02747 245 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 GUSBP08236 651 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 ELK4P28324 431 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 SHC1P29353 583 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 CPOXP36551 454 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 CD79BP40259 229 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 CASP9P55211 416 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 SIRPAP78324 504 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 FUT5Q11128 374 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 FGFBP1Q14512 234 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 PDZK1Q5T2W1 519 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 FAM214BQ7L5A3 538 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 OLIG3Q7RTU3 272 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 SPATA19Q7Z5L4 167 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 VPS37AQ8NEZ2 397 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 OR2V1Q8NHB1 315 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 ARSGQ96EG1 525 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 NEURL3Q96EH8 262 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 MAELQ96JY0 434 aaKnown RBP16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 CCDC115Q96NT0 180 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 TMEM185BQ9H7F4 350 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 BTNL2Q9UIR0 455 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 ST6GALNAC2Q9UJ37 374 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 TESMINQ9Y4I5 508 aa16.95■□□□□ 0.3
HMGB3P22-201ENST00000442010 PRAMEF27A3QJZ7 478 aa16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 EIF4E2O60573 245 aaKnown RBP16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 STX11O75558 287 aa16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 UGT2B17O75795 530 aa16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 HRGP04196 525 aa16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 OR12D1P0DN82 309 aa16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 PRKCAP17252 672 aa16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 EPHA3P29320 983 aa16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 CCKARP32238 428 aa16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 S100A3P33764 101 aa16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 NME5P56597 212 aa16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 GPR68Q15743 365 aa16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 SLC25A53Q5H9E4 307 aa16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 ATG16L1Q676U5 607 aa16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 LILRA2Q8N149 483 aa16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 ZNF610Q8N9Z0 462 aa16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 FBXO27Q8NI29 283 aa16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 KLHL15Q96M94 604 aa16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 SAP130Q9H0E3 1048 aa16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 CXXC4Q9H2H0 198 aa16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 MANSC1Q9H8J5 431 aa16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 PLEKHF2Q9H8W4 249 aa16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 ELOVL5Q9NYP7 299 aa16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 MARCOQ9UEW3 520 aaPredicted RBP16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 MKLN1Q9UL63 735 aa16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 GPC6Q9Y625 555 aaPredicted RBP16.94■□□□□ 0.3
HMGB3P22-201ENST00000442010 GOLGA8QA0A0J9YX86 632 aa16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 A0A1W2PPR1 153 aa16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 GOLGA8OA6NCC3 632 aa16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 SERINC4A6NH21 518 aa16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 TRPC5OSA6NMA1 111 aa16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 GOLGA8NF8WBI6 632 aa16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 GTPBP1O00178 669 aaKnown RBP16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 ZNF195O14628 629 aa16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 ZNF264O43296 627 aa16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 SS18L1O75177 396 aaPredicted RBP16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 ART1P52961 327 aa16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 SKP2Q13309 424 aa16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 HBMQ6B0K9 141 aa16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 TYW3Q6IPR3 259 aaKnown RBP16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 TNFAIP8L2Q6P589 184 aaPredicted RBP16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 MAVSQ7Z434 540 aa16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 ZNF614Q8N883 585 aa16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 TOR1AIP2Q8NFQ8 470 aa16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 OR5W2Q8NH69 310 aa16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 OSTF1Q92882 214 aa16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 GMPPAQ96IJ6 420 aaPredicted RBP16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 WFIKKN1Q96NZ8 548 aa16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 LAT2Q9GZY6 243 aa16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 PLSCR4Q9NRQ2 329 aa16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 CCM2LQ9NUG4 571 aaPredicted RBP16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 EXD2Q9NVH0 621 aa16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 MCTS1Q9ULC4 181 aaKnown RBP16.93■□□□□ 0.3
HMGB3P22-201ENST00000442010 C9JVG2 144 aa16.92■□□□□ 0.3
HMGB3P22-201ENST00000442010 SLCO1B7G3V0H7 640 aa16.92■□□□□ 0.3
HMGB3P22-201ENST00000442010 KLF11O14901 512 aa16.92■□□□□ 0.3
HMGB3P22-201ENST00000442010 KIAA0513O60268 411 aa16.92■□□□□ 0.3
HMGB3P22-201ENST00000442010 NUDT14O95848 222 aa16.92■□□□□ 0.3
HMGB3P22-201ENST00000442010 AGR2O95994 175 aa16.92■□□□□ 0.3
HMGB3P22-201ENST00000442010 PGRP06401 933 aa16.92■□□□□ 0.3
HMGB3P22-201ENST00000442010 KITP10721 976 aa16.92■□□□□ 0.3
HMGB3P22-201ENST00000442010 UBL4AP11441 157 aa16.92■□□□□ 0.3
HMGB3P22-201ENST00000442010 ME2P23368 584 aa16.92■□□□□ 0.3
HMGB3P22-201ENST00000442010 UGT2B10P36537 528 aa16.92■□□□□ 0.3
HMGB3P22-201ENST00000442010 MAPK14Q16539 360 aa16.92■□□□□ 0.3
HMGB3P22-201ENST00000442010 FRRS1Q6ZNA5 592 aa16.92■□□□□ 0.3
HMGB3P22-201ENST00000442010 C16orf62Q7Z3J2 963 aa16.92■□□□□ 0.3
HMGB3P22-201ENST00000442010 FAM71CQ8NEG0 241 aa16.92■□□□□ 0.3
HMGB3P22-201ENST00000442010 OR6K3Q8NGY3 331 aa16.92■□□□□ 0.3
HMGB3P22-201ENST00000442010 XAGE5Q8WWM1 108 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms