RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 NDUFB5O43674 189 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 EPHA2P29317 976 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 ATP6V1E1P36543 226 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 GPR4P46093 362 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 CTBP2P56545 445 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 CDK5Q00535 292 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 NCF4Q15080 339 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 ANKDD1AQ495B1 522 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 SLC25A30Q5SVS4 291 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 PRAMEF17Q5VTA0 474 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 FOXB2Q5VYV0 432 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 ZNF620Q6ZNG0 422 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 Q6ZPB1 254 aaPredicted RBP5.55□□□□□ -1.52
VPS50-205ENST00000441602 TMPRSS11FQ6ZWK6 438 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 CPEB2Q7Z5Q1 589 aaKnown RBP5.55□□□□□ -1.52
VPS50-205ENST00000441602 NUBPLQ8TB37 319 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 GGHQ92820 318 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 EFHD2Q96C19 240 aaPredicted RBP5.55□□□□□ -1.52
VPS50-205ENST00000441602 ISOC1Q96CN7 298 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 BPIFA2Q96DR5 249 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 OMA1Q96E52 524 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 TMEM80Q96HE8 168 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 IL4I1Q96RQ9 567 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 RXFP3Q9NSD7 469 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 EXOSC1Q9Y3B2 195 aaKnown RBP5.55□□□□□ -1.52
VPS50-205ENST00000441602 TP53BP1Q12888 1972 aaPredicted RBP5.55□□□□□ -1.52
VPS50-205ENST00000441602 HRKO00198 91 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 PRODHO43272 600 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 TLX2O43763 284 aaPredicted RBP5.55□□□□□ -1.52
VPS50-205ENST00000441602 IGKV1D-16P01601 117 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 HIST1H2ABP04908 130 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 CDK4P11802 303 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 LGALS3BPQ08380 585 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 ST3GAL4Q11206 333 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 TMED1Q13445 227 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 KLHL26Q53HC5 615 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 DCAF12Q5T6F0 453 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 TMEM164Q5U3C3 297 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 TMEM236Q5W0B7 351 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 PLAG1Q6DJT9 500 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 ARHGAP11AQ6P4F7 1023 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 COX15Q7KZN9 410 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 HIST3H2AQ7L7L0 130 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 C10orf53Q8N6V4 93 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 OR4N2Q8NGD1 307 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 TMEM255BQ8WV15 326 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 TMEM234Q8WY98 164 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 HIST1H2ACQ93077 130 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 ADOQ96SZ5 270 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 DEFB126Q9BYW3 111 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 FN3KQ9H479 309 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 WDR70Q9NW82 654 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 DNAJC27Q9NZQ0 273 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 CNIH4Q9P003 139 aa5.55□□□□□ -1.52
VPS50-205ENST00000441602 VSTM2BA6NLU5 285 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 CLDN24A6NM45 220 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 SLC22A1O15245 554 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 GALR2O43603 387 aaPredicted RBP5.54□□□□□ -1.52
VPS50-205ENST00000441602 SEMA7AO75326 666 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 SLC25A12O75746 678 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 RAB36O95755 333 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 BCL10O95999 233 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 PRG2P13727 222 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 HK1P19367 917 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 ITPKBP27987 946 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 HTR2AP28223 471 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 FOLR3P41439 243 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 CLK1P49759 484 aaKnown RBP5.54□□□□□ -1.52
VPS50-205ENST00000441602 NUDT6P53370 316 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 SUMO3P55854 103 aaPredicted RBP5.54□□□□□ -1.52
VPS50-205ENST00000441602 EMX1Q04741 257 aaPredicted RBP5.54□□□□□ -1.52
VPS50-205ENST00000441602 ZFP36L1Q07352 338 aaKnown RBP5.54□□□□□ -1.52
VPS50-205ENST00000441602 EXT1Q16394 746 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 SYT6Q5T7P8 510 aaPredicted RBP5.54□□□□□ -1.52
VPS50-205ENST00000441602 LCN1P1Q5VSP4 162 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 UBE2UQ5VVX9 321 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 SMARCD3Q6STE5 483 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 C5orf46Q6UWT4 87 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 NUP54Q7Z3B4 507 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 ZAR1Q86SH2 424 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 P2RY8Q86VZ1 359 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 CCDC71Q8IV32 467 aaPredicted RBP5.54□□□□□ -1.52
VPS50-205ENST00000441602 APH1BQ8WW43 257 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 ADIPOR1Q96A54 375 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 TMIGD2Q96BF3 282 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 C12orf43Q96C57 262 aaKnown RBP5.54□□□□□ -1.52
VPS50-205ENST00000441602 DTNBP1Q96EV8 351 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 WFDC6Q9BQY6 131 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 IFT27Q9BW83 186 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 PRR14Q9BWN1 585 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 LHPPQ9H008 270 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 OR52D1Q9H346 318 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 ACOT13Q9NPJ3 140 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 TMEM9BQ9NQ34 198 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 IL20Q9NYY1 176 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 KCNE5Q9UJ90 142 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 KLHL21Q9UJP4 597 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 DTX4Q9Y2E6 619 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 NTNG1Q9Y2I2 539 aa5.54□□□□□ -1.52
VPS50-205ENST00000441602 SLC6A5Q9Y345 797 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms