RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 DIMT1Q9UNQ2 313 aaKnown RBP4.41□□□□□ -1.7
EDEM3-203ENST00000439962 GRIP1Q9Y3R0 1128 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 TESMINQ9Y4I5 508 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 ASH1LQ9NR48 2969 aaKnown RBP4.41□□□□□ -1.7
EDEM3-203ENST00000439962 CACNA1DQ01668 2161 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 TMEM129A0AVI4 362 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 DUXAA6NLW8 204 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 HMGN4O00479 90 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 ERI3O43414 337 aaKnown RBP4.4□□□□□ -1.7
EDEM3-203ENST00000439962 TMEM127O75204 238 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 NME6O75414 186 aaPredicted RBP4.4□□□□□ -1.7
EDEM3-203ENST00000439962 RECKO95980 971 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 FHP07954 510 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 FGF5P12034 268 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 BMP4P12644 408 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 CD53P19397 219 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 MAOAP21397 527 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 ELAVL4P26378 380 aaKnown RBP4.4□□□□□ -1.7
EDEM3-203ENST00000439962 PRKAR1BP31321 381 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 SOX11P35716 441 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 FOLR3P41439 243 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 STXBP1P61764 594 aaKnown RBP4.4□□□□□ -1.7
EDEM3-203ENST00000439962 CSNK1G2P78368 415 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 BTN3A2P78410 334 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 PRR5P85299 388 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 EFNB1P98172 346 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 BDH1Q02338 343 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 GRM7Q14831 915 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 PRR30Q53SZ7 412 aaPredicted RBP4.4□□□□□ -1.7
EDEM3-203ENST00000439962 B3GNTL1Q67FW5 361 aaPredicted RBP4.4□□□□□ -1.7
EDEM3-203ENST00000439962 ZCCHC12Q6PEW1 402 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 C6orf120Q7Z4R8 191 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 EGFL6Q8IUX8 553 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 MFSD9Q8NBP5 474 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 GNPDA2Q8TDQ7 276 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 RELTQ969Z4 430 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 TXNDC15Q96J42 360 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 CD180Q99467 661 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 ARHGDIGQ99819 225 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 OR51B5Q9H339 312 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 PRORYQ9H606 182 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 MOV10Q9HCE1 1003 aaKnown RBP4.4□□□□□ -1.7
EDEM3-203ENST00000439962 ZNF160Q9HCG1 818 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 ZNF304Q9HCX3 659 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 POLE3Q9NRF9 147 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 SLC22A11Q9NSA0 550 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 GIMAP4Q9NUV9 329 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 NDUFB11Q9NX14 153 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 P4HTMQ9NXG6 502 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 FBXW2Q9UKT8 454 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 LSM2Q9Y333 95 aaKnown RBP4.4□□□□□ -1.7
EDEM3-203ENST00000439962 IFT52Q9Y366 437 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 EXOSC1Q9Y3B2 195 aaKnown RBP4.4□□□□□ -1.7
EDEM3-203ENST00000439962 CORINQ9Y5Q5 1042 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 HEMK1Q9Y5R4 338 aaPredicted RBP4.4□□□□□ -1.7
EDEM3-203ENST00000439962 LRBAP50851 2863 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 NINQ8N4C6 2090 aa4.4□□□□□ -1.7
EDEM3-203ENST00000439962 A0A1B0GX78 115 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 HTR3EA5X5Y0 456 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF891A8MT65 544 aaPredicted RBP4.4□□□□□ -1.71
EDEM3-203ENST00000439962 SEC14L5O43304 696 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 UGT2B17O75795 530 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 DLGAP3O95886 979 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 TBX6O95947 436 aaPredicted RBP4.4□□□□□ -1.71
EDEM3-203ENST00000439962 AK1P00568 194 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 IL1AP01583 271 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 ANKRD34CP0C6C1 535 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 FBLP22087 321 aaKnown RBP4.4□□□□□ -1.71
EDEM3-203ENST00000439962 SOAT1P35610 550 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 RFC3P40938 356 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 MAP2K4P45985 399 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 CCT3P49368 545 aaKnown RBP4.4□□□□□ -1.71
EDEM3-203ENST00000439962 SMSP52788 366 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 BTG2P78543 158 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 CDK5Q00535 292 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 ST3GAL4Q11206 333 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 RAB40BQ12829 278 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 ITGADQ13349 1161 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 GPR50Q13585 617 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 LINC00303Q3SY05 128 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 ARMCX4Q5H9R4 360 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 ANKRD34AQ69YU3 496 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 RPL13AP3Q6NVV1 102 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 METAP1DQ6UB28 335 aaPredicted RBP4.4□□□□□ -1.71
EDEM3-203ENST00000439962 CASP12Q6UXS9 341 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 C16orf47Q6ZP98 133 aaPredicted RBP4.4□□□□□ -1.71
EDEM3-203ENST00000439962 PTCHD4Q6ZW05 846 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 CCDC103Q8IW40 242 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 CYP4Z2PQ8N1L4 340 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 NANOGP1Q8N7R0 232 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 ANKRD53Q8N9V6 530 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 AQP11Q8NBQ7 271 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 CLEC1AQ8NC01 280 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 C7orf57Q8NEG2 295 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 OR2L5Q8NG80 312 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 OR8K5Q8NH50 307 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 NDNFQ8TB73 568 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 TSLPQ969D9 159 aa4.4□□□□□ -1.71
EDEM3-203ENST00000439962 ABTB1Q969K4 478 aaPredicted RBP4.4□□□□□ -1.71
EDEM3-203ENST00000439962 TMCO6Q96DC7 493 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms