RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 OR14A2Q96R54 314 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 OR7D2Q96RA2 312 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 PDCD1LG2Q9BQ51 273 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 PINK1Q9BXM7 581 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 GHITMQ9H3K2 345 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 SYNPO2LQ9H987 977 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 NOX3Q9HBY0 568 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 MAN2C1Q9NTJ4 1040 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 DUX4Q9UBX2 424 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 FBXL2Q9UKC9 423 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 KCNK6Q9Y257 313 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 MYOFQ9NZM1 2061 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 FNDC1Q4ZHG4 1894 aaPredicted RBP8.44□□□□□ -1.06
COPB1-202ENST00000439561 A0A0G2JPF8 293 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 PRAMEF27A3QJZ7 478 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 HNRNPCL3B7ZW38 293 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 UBL3O95164 117 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 RASGRP1O95267 797 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 HNRNPCL4P0DMR1 293 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 ZNF3P17036 446 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 CERS1P27544 350 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 ADH7P40394 386 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 ERVFC1P60507 584 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 BTN3A2P78410 334 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 OR5M10Q6IEU7 315 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 LRRN1Q6UXK5 716 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.44□□□□□ -1.064e-8■□□□□ 10.6
COPB1-202ENST00000439561 FCRLAQ7L513 359 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 RD3Q7Z3Z2 195 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 NR2C2APQ86WQ0 139 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 IFNL1Q8IU54 200 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 LRRC56Q8IYG6 542 aaPredicted RBP8.44□□□□□ -1.06
COPB1-202ENST00000439561 ANKRD53Q8N9V6 530 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 KCT2Q8NC54 265 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 MORN4Q8NDC4 146 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 CXorf40AQ8TE69 158 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 FCAMRQ8WWV6 532 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 SMPDL3BQ92485 455 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 SCMH1Q96GD3 660 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 DERL3Q96Q80 235 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 GPR174Q9BXC1 333 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 MS4A8Q9BY19 250 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 CPEB1Q9BZB8 566 aaKnown RBP8.44□□□□□ -1.06
COPB1-202ENST00000439561 ACTR6Q9GZN1 396 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 TMEM168Q9H0V1 697 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 RRAGCQ9HB90 399 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 SIRT3Q9NTG7 399 aaPredicted RBP8.44□□□□□ -1.06
COPB1-202ENST00000439561 HCFC1R1Q9NWW0 138 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 MLXQ9UH92 298 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 CBLCQ9ULV8 474 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 ANTXRLA6NF34 631 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 GMDSO60547 372 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 RRASP10301 218 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 TFPIP10646 304 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 POU3F2P20265 443 aaPredicted RBP8.44□□□□□ -1.06
COPB1-202ENST00000439561 PSMB1P20618 241 aaKnown RBP8.44□□□□□ -1.06
COPB1-202ENST00000439561 BMP8BP34820 402 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 GDI2P50395 445 aaKnown RBP8.44□□□□□ -1.06
COPB1-202ENST00000439561 CAMK2DQ13557 499 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 GSG1Q2KHT4 349 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 TUSC1Q2TAM9 212 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 FIGNL1Q6PIW4 674 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 Q6ZTK2 550 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 BTN2A1Q7KYR7 527 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 TRILQ7L0X0 811 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 PARS2Q7L3T8 475 aaKnown RBP8.44□□□□□ -1.06
COPB1-202ENST00000439561 GDF7Q7Z4P5 450 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 BMP8AQ7Z5Y6 402 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 OR56A1Q8NGH5 318 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 OR52B4Q8NGK2 314 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 PFN4Q8NHR9 129 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 ZDHHC1Q8WTX9 485 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 PPP1R16AQ96I34 528 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 KCNJ15Q99712 375 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 SEMA4CQ9C0C4 833 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 SLITRK2Q9H156 845 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 TAS2R3Q9NYW6 316 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 KLK11Q9UBX7 282 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 FBXL4Q9UKA2 621 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 IKZF2Q9UKS7 526 aa8.44□□□□□ -1.06
COPB1-202ENST00000439561 LOC100509620A0A075B734 347 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 ZNF860A6NHJ4 632 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 LRRC72A6NJI9 287 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 KDM4EB2RXH2 506 aaPredicted RBP8.43□□□□□ -1.06
COPB1-202ENST00000439561 E9PQ18 207 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 KRT33AO76009 404 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 ATF1P18846 271 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 NFYAP23511 347 aaPredicted RBP8.43□□□□□ -1.06
COPB1-202ENST00000439561 PTBP1P26599 531 aaKnown RBP eCLIP8.43□□□□□ -1.06
COPB1-202ENST00000439561 TEAD1P28347 426 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 CTGFP29279 349 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 BSGP35613 385 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 WASP42768 502 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 TPMTP51580 245 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 ZNF155Q12901 538 aaPredicted RBP8.43□□□□□ -1.06
COPB1-202ENST00000439561 CRMP1Q14194 572 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 METTL11BQ5VVY1 283 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 KIAA1211LQ6NV74 962 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 ZNF620Q6ZNG0 422 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 PDZD9Q8IXQ8 264 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms