RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 RPS8P62241 208 aaKnown RBP2.58□□□□□ -2
VPS41-207ENST00000439468 CD47Q08722 323 aa2.58□□□□□ -2
VPS41-207ENST00000439468 SELPLGQ14242 412 aa2.58□□□□□ -2
VPS41-207ENST00000439468 PVRIGQ6DKI7 326 aa2.58□□□□□ -2
VPS41-207ENST00000439468 KCNIP4Q6PIL6 250 aa2.58□□□□□ -2
VPS41-207ENST00000439468 C2orf66Q6UXQ4 117 aa2.58□□□□□ -2
VPS41-207ENST00000439468 LRRC70Q7Z2Q7 622 aa2.58□□□□□ -2
VPS41-207ENST00000439468 FBXO16Q8IX29 292 aaPredicted RBP2.58□□□□□ -2
VPS41-207ENST00000439468 OR2T3Q8NH03 318 aa2.58□□□□□ -2
VPS41-207ENST00000439468 SLC25A38Q96DW6 304 aa2.58□□□□□ -2
VPS41-207ENST00000439468 SDSLQ96GA7 329 aa2.58□□□□□ -2
VPS41-207ENST00000439468 TMEM80Q96HE8 168 aa2.58□□□□□ -2
VPS41-207ENST00000439468 SIGLEC12Q96PQ1 595 aa2.58□□□□□ -2
VPS41-207ENST00000439468 SLC6A7Q99884 636 aa2.58□□□□□ -2
VPS41-207ENST00000439468 GLT8D2Q9H1C3 349 aa2.58□□□□□ -2
VPS41-207ENST00000439468 CAB39LQ9H9S4 337 aa2.58□□□□□ -2
VPS41-207ENST00000439468 ZNF275Q9NSD4 429 aaPredicted RBP2.58□□□□□ -2
VPS41-207ENST00000439468 EPS15L1Q9UBC2 864 aa2.58□□□□□ -2
VPS41-207ENST00000439468 CYTH4Q9UIA0 394 aa2.58□□□□□ -2
VPS41-207ENST00000439468 KIF3AQ9Y496 699 aa2.58□□□□□ -2
VPS41-207ENST00000439468 CD109Q6YHK3 1445 aa2.58□□□□□ -2
VPS41-207ENST00000439468 ZMYM4Q5VZL5 1548 aa2.58□□□□□ -2
VPS41-207ENST00000439468 ABCA10Q8WWZ4 1543 aa2.58□□□□□ -2
VPS41-207ENST00000439468 PPIAL4CA0A0B4J2A2 164 aa2.57□□□□□ -2
VPS41-207ENST00000439468 TRIM3O75382 744 aaPredicted RBP2.57□□□□□ -2
VPS41-207ENST00000439468 GPX5O75715 221 aa2.57□□□□□ -2
VPS41-207ENST00000439468 CD55P08174 381 aa2.57□□□□□ -2
VPS41-207ENST00000439468 IQCF3P0C7M6 154 aa2.57□□□□□ -2
VPS41-207ENST00000439468 PPIAL4GP0DN37 164 aa2.57□□□□□ -2
VPS41-207ENST00000439468 BCKDHAP12694 445 aa2.57□□□□□ -2
VPS41-207ENST00000439468 RPA2P15927 270 aa2.57□□□□□ -2
VPS41-207ENST00000439468 PTMSP20962 102 aa2.57□□□□□ -2
VPS41-207ENST00000439468 NT5EP21589 574 aa2.57□□□□□ -2
VPS41-207ENST00000439468 PSMA5P28066 241 aa2.57□□□□□ -2
VPS41-207ENST00000439468 NF2P35240 595 aa2.57□□□□□ -2
VPS41-207ENST00000439468 HPCAL1P37235 193 aa2.57□□□□□ -2
VPS41-207ENST00000439468 PLA2G16P53816 162 aa2.57□□□□□ -2
VPS41-207ENST00000439468 RND3P61587 244 aa2.57□□□□□ -2
VPS41-207ENST00000439468 BDH1Q02338 343 aa2.57□□□□□ -2
VPS41-207ENST00000439468 LAGE3Q14657 143 aa2.57□□□□□ -2
VPS41-207ENST00000439468 SLC5A12Q1EHB4 618 aa2.57□□□□□ -2
VPS41-207ENST00000439468 RNF212Q495C1 297 aa2.57□□□□□ -2
VPS41-207ENST00000439468 SLC36A3Q495N2 470 aa2.57□□□□□ -2
VPS41-207ENST00000439468 SERPINA9Q86WD7 417 aa2.57□□□□□ -2
VPS41-207ENST00000439468 TMEM17Q86X19 198 aa2.57□□□□□ -2
VPS41-207ENST00000439468 CEND1Q8N111 149 aa2.57□□□□□ -2
VPS41-207ENST00000439468 OR51G2Q8NGK0 314 aa2.57□□□□□ -2
VPS41-207ENST00000439468 OR5L2Q8NGL0 311 aa2.57□□□□□ -2
VPS41-207ENST00000439468 HAVCR1Q96D42 359 aa2.57□□□□□ -2
VPS41-207ENST00000439468 CYP2S1Q96SQ9 504 aa2.57□□□□□ -2
VPS41-207ENST00000439468 GPA33Q99795 319 aa2.57□□□□□ -2
VPS41-207ENST00000439468 FEM1AQ9BSK4 669 aa2.57□□□□□ -2
VPS41-207ENST00000439468 DPH7Q9BTV6 452 aa2.57□□□□□ -2
VPS41-207ENST00000439468 RIBC2Q9H4K1 309 aa2.57□□□□□ -2
VPS41-207ENST00000439468 RAB18Q9NP72 206 aa2.57□□□□□ -2
VPS41-207ENST00000439468 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.57□□□□□ -2
VPS41-207ENST00000439468 AATFQ9NY61 560 aaKnown RBP eCLIP2.57□□□□□ -2
VPS41-207ENST00000439468 SPRR3Q9UBC9 169 aa2.57□□□□□ -2
VPS41-207ENST00000439468 GNG12Q9UBI6 72 aa2.57□□□□□ -2
VPS41-207ENST00000439468 RIMS3Q9UJD0 308 aa2.57□□□□□ -2
VPS41-207ENST00000439468 CLEC4EQ9ULY5 219 aa2.57□□□□□ -2
VPS41-207ENST00000439468 MOKQ9UQ07 419 aa2.57□□□□□ -2
VPS41-207ENST00000439468 PLA2R1Q13018 1463 aa2.57□□□□□ -2
VPS41-207ENST00000439468 COL16A1Q07092 1604 aaPredicted RBP2.57□□□□□ -2
VPS41-207ENST00000439468 ABCA9Q8IUA7 1624 aa2.57□□□□□ -2
VPS41-207ENST00000439468 SHPRHQ149N8 1683 aa2.57□□□□□ -2
VPS41-207ENST00000439468 PHLPP1O60346 1717 aa2.56□□□□□ -2
VPS41-207ENST00000439468 IGLV8-61A0A075B6I0 122 aa2.56□□□□□ -2
VPS41-207ENST00000439468 KLF18A0A0U1RQI7 1052 aa2.56□□□□□ -2
VPS41-207ENST00000439468 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.56□□□□□ -2
VPS41-207ENST00000439468 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.56□□□□□ -2
VPS41-207ENST00000439468 A8MUI8 341 aa2.56□□□□□ -2
VPS41-207ENST00000439468 KLLNB2CW77 178 aa2.56□□□□□ -2
VPS41-207ENST00000439468 PPIAL4DF5H284 164 aa2.56□□□□□ -2
VPS41-207ENST00000439468 KIF2AO00139 706 aaPredicted RBP2.56□□□□□ -2
VPS41-207ENST00000439468 CLDN5O00501 218 aa2.56□□□□□ -2
VPS41-207ENST00000439468 BCAS1O75363 584 aaPredicted RBP2.56□□□□□ -2
VPS41-207ENST00000439468 MFN2O95140 757 aa2.56□□□□□ -2
VPS41-207ENST00000439468 PGK1P00558 417 aa2.56□□□□□ -2
VPS41-207ENST00000439468 UGT2B4P06133 528 aa2.56□□□□□ -2
VPS41-207ENST00000439468 ALOX5P09917 674 aa2.56□□□□□ -2
VPS41-207ENST00000439468 TPSB2P20231 275 aa2.56□□□□□ -2
VPS41-207ENST00000439468 HNF1AP20823 631 aa2.56□□□□□ -2
VPS41-207ENST00000439468 ADORA2BP29275 332 aa2.56□□□□□ -2
VPS41-207ENST00000439468 OR3A4PP47883 348 aa2.56□□□□□ -2
VPS41-207ENST00000439468 IFNAR2P48551 515 aa2.56□□□□□ -2
VPS41-207ENST00000439468 DHPSP49366 369 aaPredicted RBP2.56□□□□□ -2
VPS41-207ENST00000439468 MEOX2P50222 304 aa2.56□□□□□ -2
VPS41-207ENST00000439468 MRPS11P82912 194 aaKnown RBP2.56□□□□□ -2
VPS41-207ENST00000439468 MXD4Q14582 209 aaPredicted RBP2.56□□□□□ -2
VPS41-207ENST00000439468 TPSAB1Q15661 275 aa2.56□□□□□ -2
VPS41-207ENST00000439468 SYPL1Q16563 259 aa2.56□□□□□ -2
VPS41-207ENST00000439468 PDK4Q16654 411 aa2.56□□□□□ -2
VPS41-207ENST00000439468 NDUFA9Q16795 377 aa2.56□□□□□ -2
VPS41-207ENST00000439468 SBK1Q52WX2 424 aa2.56□□□□□ -2
VPS41-207ENST00000439468 DCST2Q5T1A1 773 aa2.56□□□□□ -2
VPS41-207ENST00000439468 UTF1Q5T230 341 aa2.56□□□□□ -2
VPS41-207ENST00000439468 WSCD1Q658N2 575 aa2.56□□□□□ -2
VPS41-207ENST00000439468 FAM43BQ6ZT52 329 aaPredicted RBP2.56□□□□□ -2
VPS41-207ENST00000439468 ACOT1Q86TX2 421 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms