RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 ATF6BQ99941 703 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 SYNPO2LQ9H987 977 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 MYNNQ9NPC7 610 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 SAGE1Q9NXZ1 904 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 MAB21L2Q9Y586 359 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 FCMRO60667 390 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 IL1AP01583 271 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 HLA-DPB1P04440 258 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 EN2P19622 333 aaPredicted RBP9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 ACSL1P33121 698 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 GJA4P35212 333 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 GCGRP47871 477 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 EVX1P49640 407 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 DEFB110Q30KQ9 67 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 YOD1Q5VVQ6 348 aaPredicted RBP9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 NKAIN4Q8IVV8 208 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 CHCHD4Q8N4Q1 142 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 METTL27Q8N6F8 245 aaPredicted RBP9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 TMEM99Q8N816 258 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 BMPERQ8N8U9 685 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 ACOT4Q8N9L9 421 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 OR52E1Q8NGJ3 308 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 PATE1Q8WXA2 126 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 VOPP1Q96AW1 172 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 CAMK1GQ96NX5 476 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 TAPBPLQ9BX59 468 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 DPH1Q9BZG8 443 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 TAS2R7Q9NYW3 318 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 USP36Q9P275 1121 aaKnown RBP9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 ADAM30Q9UKF2 790 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 SIRT4Q9Y6E7 314 aaPredicted RBP9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 OR2W5A6NFC9 320 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 MPZL2O60487 215 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 LDB3O75112 727 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 TFPIP10646 304 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 ANXA11P50995 505 aaKnown RBP9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 PRMT2P55345 433 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 SRSF5Q13243 272 aaKnown RBP9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 SF3A2Q15428 464 aaKnown RBP9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 PLK5Q496M5 336 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 TCTE1Q5JU00 501 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 OR5M10Q6IEU7 315 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 ZCCHC12Q6PEW1 402 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 MSANTD1Q6ZTZ1 278 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 NR2C2APQ86WQ0 139 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 PLPP6Q8IY26 295 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 SHISA5Q8N114 240 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 LINC01555Q8NAE3 123 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 OR8D4Q8NGM9 314 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 ACOT12Q8WYK0 555 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 KLHL28Q9NXS3 571 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 A3GALT2U3KPV4 340 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 MED12Q93074 2177 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 HMGN4O00479 90 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 KCNAB3O43448 404 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 CISD3P0C7P0 127 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 LIMS3P0CW19 117 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 LIMS4P0CW20 117 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 CLDN20P56880 219 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 RUNX3Q13761 415 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 ATRAIDQ6UW56 229 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 Q6ZTK2 550 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 RNF44Q7L0R7 432 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 KLHL36Q8N4N3 616 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 WFIKKN2Q8TEU8 576 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 MARC2Q969Z3 335 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 NXPE2Q96DL1 559 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 HHIPL1Q96JK4 782 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 IFT27Q9BW83 186 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 SGPP1Q9BX95 441 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 MS4A8Q9BY19 250 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 OR52A5Q9H2C5 316 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 SDHAF2Q9NX18 166 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 CNOT2Q9NZN8 540 aaKnown RBP9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 SESN1Q9Y6P5 492 aa9.26□□□□□ -0.93
CDC42SE1-202ENST00000439374 SH3D21A4FU49 640 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 POM121BA6NF01 834 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 ACOD1A6NK06 481 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 CACNB4O00305 520 aaPredicted RBP9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 KIAA0355O15063 1070 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 PROM1O43490 865 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 EFCAB14O75071 495 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 APODP05090 189 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 GLAP06280 429 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 ACADMP11310 421 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 CSNK2A2P19784 350 aaPredicted RBP9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 BCL6P41182 706 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 CENPAP49450 140 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 TAGLNQ01995 201 aaKnown RBP9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 KIAA1211LQ6NV74 962 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 POMZP3Q6PJE2 187 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 TRILQ7L0X0 811 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 SFTPA2Q8IWL1 248 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 OR6K6Q8NGW6 343 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 RPLP0P6Q8NHW5 317 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 FOXN4Q96NZ1 517 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 SRMSQ9H3Y6 488 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 PCDHGA9Q9Y5G4 932 aaKnown RBP9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 GMDSO60547 372 aa9.25□□□□□ -0.93
CDC42SE1-202ENST00000439374 ADAP00813 363 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms