RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 MAP3K3Q99759 626 aa14.77□□□□□ -0.04
DHFR-201ENST00000439211 LRRN3Q9H3W5 708 aa14.77□□□□□ -0.04
DHFR-201ENST00000439211 ZCCHC3Q9NUD5 404 aaKnown RBP14.77□□□□□ -0.04
DHFR-201ENST00000439211 DZANK1Q9NVP4 752 aa14.77□□□□□ -0.04
DHFR-201ENST00000439211 KCMF1Q9P0J7 381 aa14.77□□□□□ -0.04
DHFR-201ENST00000439211 KLHL42Q9P2K6 505 aa14.77□□□□□ -0.04
DHFR-201ENST00000439211 IL36AQ9UHA7 158 aa14.77□□□□□ -0.04
DHFR-201ENST00000439211 DICER1Q9UPY3 1922 aaKnown RBP14.77□□□□□ -0.04
DHFR-201ENST00000439211 MYOFQ9NZM1 2061 aa14.77□□□□□ -0.04
DHFR-201ENST00000439211 TRBV4-1A0A0J9YWV2 114 aa14.77□□□□□ -0.04
DHFR-201ENST00000439211 FMO6PO60774 539 aa14.77□□□□□ -0.04
DHFR-201ENST00000439211 GPR37L1O60883 481 aa14.77□□□□□ -0.04
DHFR-201ENST00000439211 SCN2BO60939 215 aa14.77□□□□□ -0.04
DHFR-201ENST00000439211 HPXP02790 462 aa14.77□□□□□ -0.04
DHFR-201ENST00000439211 S100A2P29034 98 aa14.77□□□□□ -0.04
DHFR-201ENST00000439211 CTNNB1P35222 781 aa14.77□□□□□ -0.04
DHFR-201ENST00000439211 SEC61A1P61619 476 aaKnown RBP14.77□□□□□ -0.04
DHFR-201ENST00000439211 TEAD2Q15562 447 aa14.77□□□□□ -0.04
DHFR-201ENST00000439211 KIAA1161Q6NSJ0 714 aa14.77□□□□□ -0.04
DHFR-201ENST00000439211 TMEM19Q96HH6 336 aa14.77□□□□□ -0.04
DHFR-201ENST00000439211 PRR14Q9BWN1 585 aa14.77□□□□□ -0.04
DHFR-201ENST00000439211 VN1R3Q9BXE9 311 aa14.77□□□□□ -0.04
DHFR-201ENST00000439211 KCNK12Q9HB15 430 aa14.77□□□□□ -0.04
DHFR-201ENST00000439211 CREBZFQ9NS37 354 aa14.77□□□□□ -0.04
DHFR-201ENST00000439211 RASD1Q9Y272 281 aa14.77□□□□□ -0.04
DHFR-201ENST00000439211 KLF2Q9Y5W3 355 aaPredicted RBP14.77□□□□□ -0.04
DHFR-201ENST00000439211 GREM1O60565 184 aa14.77□□□□□ -0.05
DHFR-201ENST00000439211 STX11O75558 287 aa14.77□□□□□ -0.05
DHFR-201ENST00000439211 PLA1AQ53H76 456 aa14.77□□□□□ -0.05
DHFR-201ENST00000439211 OLIG3Q7RTU3 272 aa14.77□□□□□ -0.05
DHFR-201ENST00000439211 LRRC28Q86X40 367 aaPredicted RBP14.77□□□□□ -0.05
DHFR-201ENST00000439211 MCATQ8IVS2 390 aaKnown RBP14.77□□□□□ -0.05
DHFR-201ENST00000439211 TCEAL8Q8IYN2 117 aa14.77□□□□□ -0.05
DHFR-201ENST00000439211 TRAM1L1Q8N609 369 aa14.77□□□□□ -0.05
DHFR-201ENST00000439211 IRF7Q92985 503 aa14.77□□□□□ -0.05
DHFR-201ENST00000439211 GAREM1Q9H706 876 aa14.77□□□□□ -0.05
DHFR-201ENST00000439211 BRF2Q9HAW0 419 aa14.77□□□□□ -0.05
DHFR-201ENST00000439211 IRAK3Q9Y616 596 aa14.77□□□□□ -0.05
DHFR-201ENST00000439211 FEZF1A0PJY2 475 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 OR6C68A6NDL8 312 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 H7BY64 318 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 ZNF8P17098 575 aaPredicted RBP14.76□□□□□ -0.05
DHFR-201ENST00000439211 ATP5A1P25705 553 aaKnown RBP14.76□□□□□ -0.05
DHFR-201ENST00000439211 RFX3P48380 749 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 FABP9Q0Z7S8 132 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 KRBOX4Q5JUW0 171 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 PLPP4Q5VZY2 271 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 HTR3DQ70Z44 454 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 PRAP1Q96NZ9 151 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 CAPN10Q9HC96 672 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 ZFP57Q9NU63 452 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 SLCO1C1Q9NYB5 712 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 STK25O00506 426 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 ADH1AP07327 375 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 CXCL2P19875 107 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 PPT1P50897 306 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 MLLT1Q03111 559 aaPredicted RBP14.76□□□□□ -0.05
DHFR-201ENST00000439211 PEA15Q15121 130 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 NUDT18Q6ZVK8 323 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 CXXC5Q7LFL8 322 aaKnown RBP14.76□□□□□ -0.05
DHFR-201ENST00000439211 TMEM150AQ86TG1 271 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 STK35Q8TDR2 534 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 GLYATL2Q8WU03 294 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 RAD51AP1Q96B01 352 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 PEX11GQ96HA9 241 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 ATF6BQ99941 703 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 SEMA4CQ9C0C4 833 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 PRKYO43930 277 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 SULT1A3P0DMM9 295 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 SULT1A4P0DMN0 295 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 PSMA3P25788 255 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 ETV5P41161 510 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 PITPNAQ00169 270 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 SLCO4C1Q6ZQN7 724 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 WNT2BQ93097 391 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 AIF1LQ9BQI0 150 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 PINK1Q9BXM7 581 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 FN3KQ9H479 309 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 DMRT3Q9NQL9 472 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 TDP1Q9NUW8 608 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 HS3ST2Q9Y278 367 aa14.76□□□□□ -0.05
DHFR-201ENST00000439211 AGAP14A8MT82 685 aa14.75□□□□□ -0.05
DHFR-201ENST00000439211 ZNF593O00488 134 aaPredicted RBP14.75□□□□□ -0.05
DHFR-201ENST00000439211 FZD7O75084 574 aa14.75□□□□□ -0.05
DHFR-201ENST00000439211 ACRP10323 421 aa14.75□□□□□ -0.05
DHFR-201ENST00000439211 PCP4P48539 62 aa14.75□□□□□ -0.05
DHFR-201ENST00000439211 ZNF791Q3KP31 576 aaPredicted RBP14.75□□□□□ -0.05
DHFR-201ENST00000439211 SLC22A10Q63ZE4 541 aa14.75□□□□□ -0.05
DHFR-201ENST00000439211 ACOT12Q8WYK0 555 aa14.75□□□□□ -0.05
DHFR-201ENST00000439211 TBX5Q99593 518 aa14.75□□□□□ -0.05
DHFR-201ENST00000439211 COMMD9Q9P000 198 aa14.75□□□□□ -0.05
DHFR-201ENST00000439211 MCRIP1C9JLW8 97 aa14.75□□□□□ -0.05
DHFR-201ENST00000439211 ANHXE9PGG2 379 aa14.75□□□□□ -0.05
DHFR-201ENST00000439211 CHST10O43529 356 aa14.75□□□□□ -0.05
DHFR-201ENST00000439211 OR12D1P0DN82 309 aa14.75□□□□□ -0.05
DHFR-201ENST00000439211 SELLP14151 372 aa14.75□□□□□ -0.05
DHFR-201ENST00000439211 FOSL2P15408 326 aa14.75□□□□□ -0.05
DHFR-201ENST00000439211 LAG3P18627 525 aa14.75□□□□□ -0.05
DHFR-201ENST00000439211 G0S2P27469 103 aa14.75□□□□□ -0.05
DHFR-201ENST00000439211 CDKN3Q16667 212 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms