RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 UGT2A3Q6UWM9 527 aa10.68□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 HDXQ7Z353 690 aa10.68□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 ZNF786Q8N393 782 aa10.68□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 BPIFB2Q8N4F0 458 aa10.68□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 WDR31Q8NA23 367 aa10.68□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 TOR1AIP2Q8NFQ8 470 aa10.68□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 TRIM58Q8NG06 486 aa10.68□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 OR9A2Q8NGT5 310 aa10.68□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 CLDND2Q8NHS1 167 aa10.68□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 ZNF417Q8TAU3 575 aa10.68□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.68□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 ZNF75CPQ92670 426 aaPredicted RBP10.68□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 CPNE4Q96A23 557 aaPredicted RBP10.68□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 WDR89Q96FK6 387 aaPredicted RBP10.68□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 ZNF587Q96SQ5 575 aaPredicted RBP10.68□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 DERL2Q9GZP9 239 aa10.68□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 BCO1Q9HAY6 547 aa10.68□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 GP6Q9HCN6 339 aa10.68□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 ACSS1Q9NUB1 689 aaPredicted RBP10.68□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 MED17Q9NVC6 651 aa10.68□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 FAM120CQ9NX05 1096 aaKnown RBP10.68□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 REV1Q9UBZ9 1251 aa10.68□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 MCM8Q9UJA3 840 aa10.68□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 TSC22D4Q9Y3Q8 395 aa10.68□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 B2RBV5 119 aa10.67□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 WISP3O95389 354 aaPredicted RBP10.67□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 ME2P23368 584 aa10.67□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 RFX3P48380 749 aa10.67□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 IDH3GP51553 393 aaPredicted RBP10.67□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 C17orf67Q0P5P2 114 aa10.67□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 CPSF6Q16630 551 aaKnown RBP eCLIP10.67□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 CDKL4Q5MAI5 379 aa10.67□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 CCNYL2Q5T2Q4 361 aa10.67□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 Q6ZPA2 131 aa10.67□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 ZC3HC1Q86WB0 502 aaKnown RBP10.67□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 CDYL2Q8N8U2 506 aa10.67□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 NAT8LQ8N9F0 302 aa10.67□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 WDR20Q8TBZ3 569 aa10.67□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 ANP32BQ92688 251 aaKnown RBP10.67□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 DESI2Q9BSY9 194 aa10.67□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 MRPL1Q9BYD6 325 aaKnown RBP10.67□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 TREM2Q9NZC2 230 aa10.67□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 A0A087WZY1 265 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 C1orf226A1L170 272 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 K7EPI3 171 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 IPO7O95373 1038 aaKnown RBP10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 UTS2O95399 124 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 PNPP00491 289 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 CD1DP15813 335 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 MDKP21741 143 aaPredicted RBP10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 GCH1P30793 250 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 RAB10P61026 200 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 IL13RA1P78552 427 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 ADIPOQQ15848 244 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 GABRA6Q16445 453 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 HP1BP3Q5SSJ5 553 aaPredicted RBP10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 TTC27Q6P3X3 843 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 C1QL2Q7Z5L3 287 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 TRABD2AQ86V40 505 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 ZNF100Q8IYN0 542 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 TEX9Q8N6V9 391 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 GATSQ8NAP1 163 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 ZNF675Q8TD23 568 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 WDR60Q8WVS4 1066 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 TM4SF18Q96CE8 201 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 LRRC58Q96CX6 371 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 C1orf147Q96MC9 270 aaPredicted RBP10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 TMPRSS13Q9BYE2 586 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 TBL1XR1Q9BZK7 514 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 RAB1BQ9H0U4 201 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 MMP27Q9H306 513 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 PLK3Q9H4B4 646 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 COQ10BQ9H8M1 238 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 CAB39LQ9H9S4 337 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 TIGARQ9NQ88 270 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 G6PC2Q9NQR9 355 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 OPTCQ9UBM4 332 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 ZDHHC2Q9UIJ5 367 aa10.66□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 TENM3Q9P273 2699 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 C7orf72A4D263 438 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 B9A039 149 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 H0YIV9 168 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 RGS14O43566 566 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 DNAJA2O60884 412 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 KERAO60938 352 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 BCAS2O75934 225 aaPredicted RBP10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 FGGP02679 453 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 PRB2P02812 416 aaPredicted RBP10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 IGFBP1P08833 259 aaPredicted RBP10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 OR4A8P0C604 315 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 GAAP10253 952 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 DDX5P17844 614 aaKnown RBP10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 PRTN3P24158 256 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 ALDH9A1P49189 494 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 CLK3P49761 638 aaKnown RBP10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 PPOXP50336 477 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 MAPK12P53778 367 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 PHEXP78562 749 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 PRR5P85299 388 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 ZNF155Q12901 538 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms