RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 RAMP1O60894 148 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 STAM2O75886 525 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 TRIM16O95361 564 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 PRAMEF12O95522 483 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 IGSF6O95976 241 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 RSPH10BP0C881 870 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 PVRP15151 417 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 PTPN4P29074 926 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 PRDX6P30041 224 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 STK19P49842 368 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 METAP1P53582 386 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 BPIFB3P59826 476 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 HAND2P61296 217 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 SRYQ05066 204 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 ZP4Q12836 540 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 DPYSQ14117 519 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 ABRAXAS2Q15018 415 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 LTB4RQ15722 352 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 PPP1R3AQ16821 1122 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 CYBRD1Q53TN4 286 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 MS4A13Q5J8X5 152 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 FAM219BQ5XKK7 198 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 TMEM26Q6ZUK4 368 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 SLC22A18ASQ8N1D0 253 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 CENPSQ8N2Z9 138 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 ARFGAP2Q8N6H7 521 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 BCORP1Q8N888 145 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 DEFB126Q9BYW3 111 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 ECT2Q9H8V3 914 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 ROPN1Q9HAT0 212 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 NGBQ9NPG2 151 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 SOHLH2Q9NX45 425 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 DHRS4-AS1Q9P1J3 65 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 ACTR3BQ9P1U1 418 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 GALPQ9UBC7 116 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 CLEC4EQ9ULY5 219 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 NUDCQ9Y266 331 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 CLCA3PQ9Y6N3 262 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 GRIN2DO15399 1336 aa2.1□□□□□ -2.07
HMGB1P31-201ENST00000437242 PTPRFP10586 1907 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 TTC26A0AVF1 554 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 RNF222A6NCQ9 220 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 TRABD2BA6NFA1 517 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 F8WDY8 70 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 TM9SF1O15321 606 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 LRRTM2O43300 516 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 TOM1L1O75674 476 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 PIGRP01833 764 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 RRASP10301 218 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 GHRP10912 638 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 CYP11B1P15538 503 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 RPA1P27694 616 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 EMDP50402 254 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 IST1P53990 364 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 HMGCS2P54868 508 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 MRPS6P82932 125 aaKnown RBP2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 HTD2P86397 168 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 ZNF33BQ06732 778 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 SPP2Q13103 211 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 SCGB2A2Q13296 93 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 CRMP1Q14194 572 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 ZKSCAN8Q15776 578 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 ZIC1Q15915 447 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 SEL1L2Q5TEA6 688 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 ZCCHC12Q6PEW1 402 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 ARSKQ6UWY0 536 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 ZNF562Q6V9R5 426 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 ADAMTSL5Q6ZMM2 481 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 TIFABQ6ZNK6 161 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 CCDC36Q8IYA8 594 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 DEFB123Q8N688 67 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 ZNF525Q8N782 197 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 NFAM1Q8NET5 270 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 OR52J3Q8NH60 311 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 VN1R17PQ8TDU5 208 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 TFB1MQ8WVM0 346 aaKnown RBP2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 GTSF1Q8WW33 167 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 FCGR1BQ92637 280 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 C11orf24Q96F05 449 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 RANBP9Q96S59 729 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 THUMPD2Q9BTF0 503 aaKnown RBP2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 FICDQ9BVA6 458 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 CARD6Q9BX69 1037 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 ADGRL4Q9HBW9 690 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 VAT1LQ9HCJ6 419 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 TIGARQ9NQ88 270 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 FAM114A2Q9NRY5 505 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 DCAF13Q9NV06 445 aaKnown RBP2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 TAS2R3Q9NYW6 316 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 P2RX2Q9UBL9 471 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 GHRLQ9UBU3 117 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 EIF3LQ9Y262 564 aaKnown RBP2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 EXOSC1Q9Y3B2 195 aaKnown RBP2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 RNF115Q9Y4L5 304 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 U3KQV3 271 aa2.09□□□□□ -2.07
HMGB1P31-201ENST00000437242 DNAH12Q6ZR08 3092 aa2.08□□□□□ -2.08
HMGB1P31-201ENST00000437242 TRAV9-2A0A087WT02 112 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms