RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 MRTO4Q9UKD2 239 aaKnown RBP6.45□□□□□ -1.38
LSM3P3-201ENST00000436601 ANGPTL2Q9UKU9 493 aa6.45□□□□□ -1.38
LSM3P3-201ENST00000436601 BAG5Q9UL15 447 aa6.45□□□□□ -1.38
LSM3P3-201ENST00000436601 ABCG2Q9UNQ0 655 aa6.45□□□□□ -1.38
LSM3P3-201ENST00000436601 ZNF443Q9Y2A4 671 aaPredicted RBP6.45□□□□□ -1.38
LSM3P3-201ENST00000436601 IFT52Q9Y366 437 aa6.45□□□□□ -1.38
LSM3P3-201ENST00000436601 SH3GLB1Q9Y371 365 aa6.45□□□□□ -1.38
LSM3P3-201ENST00000436601 NUP210LQ5VU65 1888 aa6.45□□□□□ -1.38
LSM3P3-201ENST00000436601 SPEGQ15772 3267 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 CDHR4A6H8M9 788 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 SERINC4A6NH21 518 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 M0R3H8 397 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 SYT5O00445 386 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 KLK10O43240 276 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 FADS1O60427 444 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 TPST2O60704 377 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 ICOSLGO75144 302 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 ITGA10O75578 1167 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 OR6B1O95007 311 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 DIRAS1O95057 198 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 OXSR1O95747 527 aaPredicted RBP6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 BAG2O95816 211 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 FABP3P05413 133 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 NGFRP08138 427 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 ADRB1P08588 477 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 PRKAR1AP10644 381 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 IFNGR1P15260 489 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 IL7RP16871 459 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 TBXA2RP21731 343 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 FUT4P22083 530 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 IL12BP29460 328 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 PSMD4P55036 377 aaKnown RBP6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 NRG3P56975 720 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 FBXW4P57775 412 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 SLC34A1Q06495 639 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 AIMP2Q13155 320 aaKnown RBP6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 FGFBP1Q14512 234 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 LARS2Q15031 903 aaKnown RBP6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 CD226Q15762 336 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 NPTX1Q15818 432 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 ATP6AP1Q15904 470 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 LIN52Q52LA3 116 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 PDZK1Q5T2W1 519 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 MRPL2Q5T653 305 aaKnown RBP6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 RNF220Q5VTB9 566 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 FNDC7Q5VTL7 733 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 JMJD6Q6NYC1 403 aaPredicted RBP6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 TREML4Q6UXN2 200 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 NUP54Q7Z3B4 507 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 PIWIL3Q7Z3Z3 882 aaKnown RBP6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 CARM1Q86X55 608 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 ZDHHC21Q8IVQ6 265 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 TAGAPQ8N103 731 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 PQLC1Q8N2U9 271 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 SLC5A8Q8N695 610 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 SIRT6Q8N6T7 355 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 ZNF248Q8NDW4 579 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 OR5M3Q8NGP4 307 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 VANGL1Q8TAA9 524 aaPredicted RBP6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 SLC22A8Q8TCC7 542 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 BRIX1Q8TDN6 353 aaKnown RBP6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 RNF138Q8WVD3 245 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 KCNE4Q8WWG9 221 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 RASSF5Q8WWW0 418 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 OIT3Q8WWZ8 545 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 GEMIN6Q8WXD5 167 aaKnown RBP6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 THAP4Q8WY91 577 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 CNOT9Q92600 299 aaKnown RBP6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 PROX1Q92786 737 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 GATA6Q92908 595 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 FER1L6-AS2Q96M78 137 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 NODALQ96S42 347 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 NTN4Q9HB63 628 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 AGPAT4Q9NRZ5 378 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 RIMS3Q9UJD0 308 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 YARS2Q9Y2Z4 477 aaKnown RBP6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 DTNAQ9Y4J8 743 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 GVINP1Q7Z2Y8 2422 aa6.44□□□□□ -1.38
LSM3P3-201ENST00000436601 A0A1W2PQD3 144 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 ARGFXA6NJG6 315 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 ZNF891A8MT65 544 aaPredicted RBP6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 J3KTA2 159 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 FFAR1O14842 300 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 CLOCKO15516 846 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 FRS3O43559 492 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 DNAJB5O75953 348 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 PRSS23O95084 383 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 ZNF205O95201 554 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 IFNW1P05000 195 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 PRG2P13727 222 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 HOXB6P17509 224 aaKnown RBP6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 FASP25445 335 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 KRT20P35900 424 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 SOX3P41225 446 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 YAP1P46937 504 aaKnown RBP6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 SSR4P51571 173 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 ZNF136P52737 540 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 SOX8P57073 446 aa6.43□□□□□ -1.38
LSM3P3-201ENST00000436601 HOXC5Q00444 222 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms