RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 SFTPA2Q8IWL1 248 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 CDK20Q8IZL9 346 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 VWA5B2Q8N398 1253 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 KISS1RQ969F8 398 aaPredicted RBP17.21■□□□□ 0.35
CLK1-205ENST00000434813 OTULINQ96BN8 352 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 BPIFA2Q96DR5 249 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 HDHD5Q9BXW7 423 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 HOXD1Q9GZZ0 328 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 ITGB1BP2Q9UKP3 347 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 MED31Q9Y3C7 131 aa17.21■□□□□ 0.35
CLK1-205ENST00000434813 FAM86C2PA6NEL3 165 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 OR5K3A6NET4 321 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 C12orf71A8MTZ7 269 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 SGK494L7N484 410 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 IGHV4-34P06331 123 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 GUSBP08236 651 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 SLC35E2P0CK97 266 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 SRFP11831 508 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 DRD5P21918 477 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 CFL1P23528 166 aaKnown RBP17.2■□□□□ 0.34
CLK1-205ENST00000434813 RNF144AP50876 292 aaPredicted RBP17.2■□□□□ 0.34
CLK1-205ENST00000434813 PPP1CAP62136 330 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 PDZK1Q5T2W1 519 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 OOSP2Q86WS3 158 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 OR13C2Q8NGS9 318 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 HMGB4Q8WW32 186 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 SLC22A4Q9H015 551 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 SIGLEC7Q9Y286 467 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 SOX30O94993 753 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 CELA2BP08218 269 aaPredicted RBP17.2■□□□□ 0.34
CLK1-205ENST00000434813 CAV3P56539 151 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 TAB1Q15750 504 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 SMARCD3Q6STE5 483 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 THSD4Q6ZMP0 1018 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 BMP8AQ7Z5Y6 402 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 ZAR1Q86SH2 424 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 RAB43Q86YS6 212 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 SCAIQ8N9R8 606 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 OR52R1Q8NGF1 315 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 ATF6BQ99941 703 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 ALG8Q9BVK2 526 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 ENKD1Q9H0I2 346 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 TMEM27Q9HBJ8 222 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 INPP5EQ9NRR6 644 aa17.2■□□□□ 0.34
CLK1-205ENST00000434813 USP36Q9P275 1121 aaKnown RBP17.2■□□□□ 0.34
CLK1-205ENST00000434813 SCN2AQ99250 2005 aa17.19■□□□□ 0.34
CLK1-205ENST00000434813 A0A0B4J2E0 115 aa17.19■□□□□ 0.34
CLK1-205ENST00000434813 A0A1B0GX12 115 aa17.19■□□□□ 0.34
CLK1-205ENST00000434813 SHISA3A0PJX4 238 aa17.19■□□□□ 0.34
CLK1-205ENST00000434813 SLC22A31A6NKX4 558 aa17.19■□□□□ 0.34
CLK1-205ENST00000434813 CHP2O43745 196 aa17.19■□□□□ 0.34
CLK1-205ENST00000434813 RDH16O75452 317 aa17.19■□□□□ 0.34
CLK1-205ENST00000434813 CCNKO75909 580 aa17.19■□□□□ 0.34
CLK1-205ENST00000434813 FOXK2Q01167 660 aa17.19■□□□□ 0.34
CLK1-205ENST00000434813 EIF2B5Q13144 721 aaKnown RBP17.19■□□□□ 0.34
CLK1-205ENST00000434813 TDGQ13569 410 aa17.19■□□□□ 0.34
CLK1-205ENST00000434813 DGAT2L6Q6ZPD8 337 aa17.19■□□□□ 0.34
CLK1-205ENST00000434813 LSRQ86X29 649 aaPredicted RBP17.19■□□□□ 0.34
CLK1-205ENST00000434813 GRAMD2AQ8IUY3 354 aa17.19■□□□□ 0.34
CLK1-205ENST00000434813 ARHGEF39Q8N4T4 335 aa17.19■□□□□ 0.34
CLK1-205ENST00000434813 TIMP4Q99727 224 aa17.19■□□□□ 0.34
CLK1-205ENST00000434813 LMF2Q9BU23 707 aaKnown RBP17.19■□□□□ 0.34
CLK1-205ENST00000434813 HCAR1Q9BXC0 346 aa17.19■□□□□ 0.34
CLK1-205ENST00000434813 MED20Q9H944 212 aa17.19■□□□□ 0.34
CLK1-205ENST00000434813 MEPEQ9NQ76 525 aaPredicted RBP17.19■□□□□ 0.34
CLK1-205ENST00000434813 STARD5Q9NSY2 213 aa17.19■□□□□ 0.34
CLK1-205ENST00000434813 POU2F3Q9UKI9 436 aa17.19■□□□□ 0.34
CLK1-205ENST00000434813 POMT2Q9UKY4 750 aa17.19■□□□□ 0.34
CLK1-205ENST00000434813 ZC3H12DA2A288 527 aaKnown RBP17.18■□□□□ 0.34
CLK1-205ENST00000434813 RNF13O43567 381 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 HCRTR1O43613 425 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 HCN1O60741 890 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 SAGP10523 405 aaPredicted RBP17.18■□□□□ 0.34
CLK1-205ENST00000434813 PYDC2Q56P42 97 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 SLC35F1Q5T1Q4 408 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 METAP1DQ6UB28 335 aaPredicted RBP17.18■□□□□ 0.34
CLK1-205ENST00000434813 B3GLCTQ6Y288 498 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 TMEM91Q6ZNR0 172 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 TMEM99Q8N816 258 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 NACC2Q96BF6 587 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 SOSTQ9BQB4 213 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 ZNF426Q9BUY5 554 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 IFT27Q9BW83 186 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 SEMA6CQ9H3T2 930 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 SYNDIG1Q9H7V2 258 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 ISG20L2Q9H9L3 353 aaKnown RBP17.18■□□□□ 0.34
CLK1-205ENST00000434813 SLC2A4RGQ9NR83 387 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 GPR27Q9NS67 375 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 BABAM2Q9NXR7 383 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 COMMD3Q9UBI1 195 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 CCDC182A6NF36 153 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 PRR23D1E9PI22 279 aaPredicted RBP17.18■□□□□ 0.34
CLK1-205ENST00000434813 OR10H2O60403 315 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 RGS9O75916 674 aaPredicted RBP17.18■□□□□ 0.34
CLK1-205ENST00000434813 HLA-DQB1P01920 261 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 PRR23D2P0DMB1 279 aaPredicted RBP17.18■□□□□ 0.34
CLK1-205ENST00000434813 PTBP1P26599 531 aaKnown RBP eCLIP17.18■□□□□ 0.34
CLK1-205ENST00000434813 RPS5P46782 204 aaKnown RBP17.18■□□□□ 0.34
CLK1-205ENST00000434813 PSG6Q00889 435 aa17.18■□□□□ 0.34
CLK1-205ENST00000434813 ZNF761Q86XN6 746 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms