RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 C20orf27Q9GZN8 174 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 UCK1Q9HA47 277 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 PDCD5O14737 125 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 FOXK1P85037 733 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 ATXN7L3Q14CW9 347 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-207ENST00000429896 ZNF750Q32MQ0 723 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 OR1L3Q8NH93 324 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 CASTOR1Q8WTX7 329 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 OR4K3Q96R72 315 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 DDX31Q9H8H2 851 aaKnown RBP12.03□□□□□ -0.48
PTCH1-207ENST00000429896 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 CASC3O15234 703 aaKnown RBP12.03□□□□□ -0.48
PTCH1-207ENST00000429896 TNFSF12O43508 249 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 CD36P16671 472 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 AGAP7PQ5VUJ5 663 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 ZNF565Q8N9K5 539 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 TEX19Q8NA77 164 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 SLC2A12Q8TD20 617 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 DNASE2BQ8WZ79 361 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 AGAP4Q96P64 663 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 SLC5A7Q9GZV3 580 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 GLIPR2Q9H4G4 154 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 TREM1Q9NP99 234 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 ASIC5Q9NY37 505 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 MCTS1Q9ULC4 181 aaKnown RBP12.03□□□□□ -0.48
PTCH1-207ENST00000429896 CIB4A0PJX0 185 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 SMCO3A2RU48 225 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 CFL1P23528 166 aaKnown RBP12.03□□□□□ -0.48
PTCH1-207ENST00000429896 SSTR4P31391 388 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 RPL13AP3Q6NVV1 102 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 PKP2Q99959 881 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 MAGIXQ9H6Y5 334 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 ZNF99A8MXY4 864 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-207ENST00000429896 F10P00742 488 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 SFTPDP35247 375 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 MAGEA2P43356 314 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 ZNF528Q3MIS6 628 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 KLHL22Q53GT1 634 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 SLC22A10Q63ZE4 541 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 RPS19BP1Q86WX3 136 aaKnown RBP12.03□□□□□ -0.48
PTCH1-207ENST00000429896 MISPQ8IVT2 679 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 SENP5Q96HI0 755 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-207ENST00000429896 OR5B2Q96R09 309 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 TMEM185BQ9H7F4 350 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 OR2A25A4D2G3 310 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 MFSD13AQ14CX5 517 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 MEP1AQ16819 746 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 EXOC3L2Q2M3D2 409 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 SLC25A25Q6KCM7 469 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 SLC22A18ASQ8N1D0 253 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 MORN4Q8NDC4 146 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 SMURF2Q9HAU4 748 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 ENY2Q9NPA8 101 aa12.03□□□□□ -0.48
PTCH1-207ENST00000429896 SH3PXD2BA1X283 911 aa12.02□□□□□ -0.48
PTCH1-207ENST00000429896 OR6C76A6NM76 312 aa12.02□□□□□ -0.48
PTCH1-207ENST00000429896 ERMP1Q7Z2K6 904 aa12.02□□□□□ -0.48
PTCH1-207ENST00000429896 TMPRSS11EQ9UL52 423 aa12.02□□□□□ -0.48
PTCH1-207ENST00000429896 CAMK2AQ9UQM7 478 aa12.02□□□□□ -0.48
PTCH1-207ENST00000429896 ZNF443Q9Y2A4 671 aaPredicted RBP12.02□□□□□ -0.48
PTCH1-207ENST00000429896 A0A1B0GV50 99 aa12.02□□□□□ -0.48
PTCH1-207ENST00000429896 RLN2P04090 185 aa12.02□□□□□ -0.48
PTCH1-207ENST00000429896 CSNK2A1P68400 391 aaPredicted RBP12.02□□□□□ -0.48
PTCH1-207ENST00000429896 ILKQ13418 452 aa12.02□□□□□ -0.48
PTCH1-207ENST00000429896 VEZF1Q14119 521 aa12.02□□□□□ -0.48
PTCH1-207ENST00000429896 SGCAQ16586 387 aa12.02□□□□□ -0.48
PTCH1-207ENST00000429896 PRAMEF20Q5VT98 475 aa12.02□□□□□ -0.48
PTCH1-207ENST00000429896 SLC23A3Q6PIS1 610 aa12.02□□□□□ -0.48
PTCH1-207ENST00000429896 XKRXQ6PP77 449 aa12.02□□□□□ -0.48
PTCH1-207ENST00000429896 GPALPP1Q8IXQ4 340 aa12.02□□□□□ -0.48
PTCH1-207ENST00000429896 C8orf44Q96CB5 159 aa12.02□□□□□ -0.48
PTCH1-207ENST00000429896 DNAJC27Q9NZQ0 273 aa12.02□□□□□ -0.48
PTCH1-207ENST00000429896 VAPAQ9P0L0 249 aa12.02□□□□□ -0.48
PTCH1-207ENST00000429896 OAZ3Q9UMX2 235 aa12.02□□□□□ -0.48
PTCH1-207ENST00000429896 SPARCP09486 303 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 MSL3P1P0C860 447 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 GSTT2BP0CG30 244 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 CKMT1AP12532 417 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 HSD17B1P14061 328 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 PNLIPP16233 465 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 STT3AP46977 705 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 SOX2P48431 317 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 GAB4Q2WGN9 574 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 TPRG1LQ5T0D9 272 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 TAS2R7Q9NYW3 318 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 RPL36Q9Y3U8 105 aaKnown RBP12.02□□□□□ -0.49
PTCH1-207ENST00000429896 WNT1P04628 370 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 ZNF597Q96LX8 424 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 OR51B6Q9H340 312 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 CXorf21Q9HAI6 301 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 NANSQ9NR45 359 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 PCOLCE2Q9UKZ9 415 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 PCDHGA7Q9Y5G6 932 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 A0A1W2PR48 441 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 SLC2A2P11168 524 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-207ENST00000429896 MAGEA8P43361 318 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 NDUFAF7Q7L592 441 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 VTCN1Q7Z7D3 282 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 SIRT6Q8N6T7 355 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 COQ8AQ8NI60 647 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 TRMT10AQ8TBZ6 339 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms