RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 ME2P23368 584 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 MPIP34949 423 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 STXBP1P61764 594 aaKnown RBP8.12□□□□□ -1.11
NUP98-207ENST00000429801 TGM3Q08188 693 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 ZIC1Q15915 447 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 CYP2R1Q6VVX0 501 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 LRRC18Q8N456 261 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 C1orf52Q8N6N3 182 aaKnown RBP8.12□□□□□ -1.11
NUP98-207ENST00000429801 CAMKVQ8NCB2 501 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 RGMAQ96B86 450 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 FCRL1Q96LA6 429 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 NLNQ9BYT8 704 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 CHRNA10Q9GZZ6 450 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 RIBC2Q9H4K1 309 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 KAT8Q9H7Z6 458 aaKnown RBP8.12□□□□□ -1.11
NUP98-207ENST00000429801 PDE7BQ9NP56 450 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 NDRG3Q9UGV2 375 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 OSGIN1Q9UJX0 560 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 GTF2A1LQ9UNN4 478 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 WASF3Q9UPY6 502 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 SAMHD1Q9Y3Z3 626 aaKnown RBP8.12□□□□□ -1.11
NUP98-207ENST00000429801 HEATR5BQ9P2D3 2071 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 SAP18O00422 153 aaKnown RBP8.12□□□□□ -1.11
NUP98-207ENST00000429801 CDX4O14627 284 aaPredicted RBP8.12□□□□□ -1.11
NUP98-207ENST00000429801 SRPX2O60687 465 aaPredicted RBP8.12□□□□□ -1.11
NUP98-207ENST00000429801 SLC22A3O75751 556 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 GADD45GO95257 159 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 TBX6O95947 436 aaPredicted RBP8.12□□□□□ -1.11
NUP98-207ENST00000429801 RAF1P04049 648 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 CLUP10909 449 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 BCKDHAP12694 445 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 GPX3P22352 226 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 PTBP1P26599 531 aaKnown RBP eCLIP8.12□□□□□ -1.11
NUP98-207ENST00000429801 TIA1P31483 386 aaKnown RBP eCLIP8.12□□□□□ -1.116e-7■■□□□ 13.4
NUP98-207ENST00000429801 RPS5P46782 204 aaKnown RBP8.12□□□□□ -1.11
NUP98-207ENST00000429801 ARL4DP49703 201 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 SNRPEP62304 92 aaKnown RBP8.12□□□□□ -1.11
NUP98-207ENST00000429801 C2orf80Q0P641 193 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 MICAQ29983 383 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 AGKQ53H12 422 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 TMEM71Q6P5X7 295 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 MEX3BQ6ZN04 569 aaKnown RBP8.12□□□□□ -1.11
NUP98-207ENST00000429801 RASSF6Q6ZTQ3 369 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 VN1R4Q7Z5H5 301 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 KMT5CQ86Y97 462 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 MEIOBQ8N635 442 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 WDSUB1Q8N9V3 476 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 NT5CQ8TCD5 201 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 TM4SF19Q96DZ7 209 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 MTERF3Q96E29 417 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 FCRL4Q96PJ5 515 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 RBP7Q96R05 134 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 ZNF300Q96RE9 604 aaPredicted RBP8.12□□□□□ -1.11
NUP98-207ENST00000429801 F2RL3Q96RI0 385 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 LRRN3Q9H3W5 708 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 SRA1Q9HD15 236 aaKnown RBP8.12□□□□□ -1.11
NUP98-207ENST00000429801 NECTIN3Q9NQS3 549 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 SOHLH2Q9NX45 425 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 NDUFAF4Q9P032 175 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 CCDC167Q9P0B6 97 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 FTSJ1Q9UET6 329 aa8.12□□□□□ -1.11
NUP98-207ENST00000429801 ARID1BQ8NFD5 2236 aaPredicted RBP8.12□□□□□ -1.11
NUP98-207ENST00000429801 IGHV5-51A0A0C4DH38 117 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 GNG14A0A1W2PPG7 69 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 PLPP1O14494 284 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 PCDH7O60245 1069 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 PRAMEF10O60809 474 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 MPC2O95563 127 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 APOC3P02656 99 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 HRGP04196 525 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 RPLP0P05388 317 aaKnown RBP8.11□□□□□ -1.11
NUP98-207ENST00000429801 ANXA4P09525 319 aaPredicted RBP8.11□□□□□ -1.11
NUP98-207ENST00000429801 CSF2RBP32927 897 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 THBS2P35442 1172 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 KIR3DL2P43630 455 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 TSFMP43897 325 aaKnown RBP8.11□□□□□ -1.11
NUP98-207ENST00000429801 CCL7P80098 99 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 HSD11B2P80365 405 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 CFHR1Q03591 330 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 ZNF404Q494X3 552 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 INTS11Q5TA45 600 aaKnown RBP8.11□□□□□ -1.11
NUP98-207ENST00000429801 TRIM40Q6P9F5 258 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 RAB11FIP2Q7L804 512 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 COMMD6Q7Z4G1 85 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 C12orf45Q8N5I9 185 aaPredicted RBP8.11□□□□□ -1.11
NUP98-207ENST00000429801 C10orf53Q8N6V4 93 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 AMDHD1Q96NU7 426 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 COL21A1Q96P44 957 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 KCNC2Q96PR1 638 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 MRPL37Q9BZE1 423 aaKnown RBP8.11□□□□□ -1.11
NUP98-207ENST00000429801 DPY30Q9C005 99 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 SLC6A16Q9GZN6 736 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 EQTNQ9NQ60 294 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 SEMA5BQ9P283 1151 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 DNAJB11Q9UBS4 358 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 KLHL21Q9UJP4 597 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 ADAM29Q9UKF5 820 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 DLGAP4Q9Y2H0 992 aa8.11□□□□□ -1.11
NUP98-207ENST00000429801 GPR55Q9Y2T6 319 aaPredicted RBP8.11□□□□□ -1.11
NUP98-207ENST00000429801 RNF103-CHMP3A0A140T963 221 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms