RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 GIPC3Q8TF64 312 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 TMEM255BQ8WV15 326 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 NACC2Q96BF6 587 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 SPACA9Q96E40 222 aaPredicted RBP8.12□□□□□ -1.11
SMC6-204ENST00000428868 THOC3Q96J01 351 aaKnown RBP8.12□□□□□ -1.11
SMC6-204ENST00000428868 ZNF570Q96NI8 536 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 NPAS1Q99742 590 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 GPA33Q99795 319 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 NIPSNAP1Q9BPW8 284 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 FNDC11Q9BVV2 318 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 SCNM1Q9BWG6 230 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 CACYBPQ9HB71 228 aaKnown RBP8.12□□□□□ -1.11
SMC6-204ENST00000428868 ANKRD10Q9NXR5 420 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 MRTO4Q9UKD2 239 aaKnown RBP8.12□□□□□ -1.11
SMC6-204ENST00000428868 CNOT11Q9UKZ1 510 aaKnown RBP8.12□□□□□ -1.11
SMC6-204ENST00000428868 SLC7A7Q9UM01 511 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 FAM32AQ9Y421 112 aaKnown RBP8.12□□□□□ -1.11
SMC6-204ENST00000428868 LRRC42Q9Y546 428 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 AP4B1Q9Y6B7 739 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 CNTRLQ7Z7A1 2325 aa8.12□□□□□ -1.11
SMC6-204ENST00000428868 A0A087WUU8 490 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 A0A0B4J2E0 115 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 A0A0G2JMM0 328 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 A0A1B0GWA3 101 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 A0A1B0GX12 115 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 A0A1W2PPB8 328 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 A0A1W2PQD3 144 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 A0A1W2PRS3 328 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 SH3PXD2BA1X283 911 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 ARGFXA6NJG6 315 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 KIR3DP1A8MWS1 328 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 ALG1L2C9J202 215 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 G3V3Y1 287 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 GNB5O14775 395 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 ZNF264O43296 627 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 CCNB2O95067 398 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 OR5F1O95221 314 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 HPRP00739 348 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 SERPINA7P05543 415 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 NGFRP08138 427 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 IGFBP1P08833 259 aaPredicted RBP8.11□□□□□ -1.11
SMC6-204ENST00000428868 GNAO1P09471 354 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 CCL3P10147 92 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 THRBP10828 461 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 POU2F1P14859 743 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 UQCRBP14927 111 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 EPHA2P29317 976 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 ADH7P40394 386 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 CCR4P51679 360 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 IL1RL1Q01638 556 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 RAPSNQ13702 412 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 EFR3AQ14156 821 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 NHSL2Q5HYW2 709 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 COLEC12Q5KU26 742 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 DCAF10Q5QP82 559 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 DCST1Q5T197 706 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 PRAMEF20Q5VT98 475 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 OR5M10Q6IEU7 315 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 H3F3CQ6NXT2 135 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 PGBD2Q6P3X8 592 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 ISLR2Q6UXK2 745 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 Q6ZPB1 254 aaPredicted RBP8.11□□□□□ -1.11
SMC6-204ENST00000428868 RANBP3LQ86VV4 465 aaPredicted RBP8.11□□□□□ -1.11
SMC6-204ENST00000428868 RPS19BP1Q86WX3 136 aaKnown RBP8.11□□□□□ -1.11
SMC6-204ENST00000428868 ZNF227Q86WZ6 799 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 P3H2Q8IVL5 708 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 APLFQ8IW19 511 aaPredicted RBP8.11□□□□□ -1.11
SMC6-204ENST00000428868 CMIPQ8IY22 773 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 BEST3Q8N1M1 668 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 ARMC10Q8N2F6 343 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 CADM2Q8N3J6 435 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 SLC22A8Q8TCC7 542 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 GTPBP3Q969Y2 492 aaKnown RBP8.11□□□□□ -1.11
SMC6-204ENST00000428868 NXPE2Q96DL1 559 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 NRBF2Q96F24 287 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 FEVQ99581 238 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 ZNF559Q9BR84 538 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 TBL1XR1Q9BZK7 514 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 HOXD1Q9GZZ0 328 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 VCX3BQ9H321 246 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 TOR3AQ9H497 397 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 PROK2Q9HC23 129 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 TESQ9UGI8 421 aaKnown RBP8.11□□□□□ -1.11
SMC6-204ENST00000428868 SLC35A3Q9Y2D2 325 aa8.11□□□□□ -1.11
SMC6-204ENST00000428868 CHCHD2Q9Y6H1 151 aaPredicted RBP8.11□□□□□ -1.11
SMC6-204ENST00000428868 ATRXP46100 2492 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 A0A1W2PRQ8 180 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 TRAPPC13A5PLN9 417 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 GTPBP1O00178 669 aaKnown RBP8.1□□□□□ -1.11
SMC6-204ENST00000428868 FAAHO00519 579 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 EFSO43281 561 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 HCRTR2O43614 444 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 NDUFB5O43674 189 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 FMO6PO60774 539 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 GASTP01350 101 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 TP53P04637 393 aaPredicted RBP8.1□□□□□ -1.11
SMC6-204ENST00000428868 HPGDP15428 266 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 FUT1P19526 365 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 IGFBP5P24593 272 aa8.1□□□□□ -1.11
SMC6-204ENST00000428868 LCN1P31025 176 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms