RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 HOXB9P17482 250 aaPredicted RBP8.24□□□□□ -1.09
SMC1A-203ENST00000428014 POU3F2P20265 443 aaPredicted RBP8.24□□□□□ -1.09
SMC1A-203ENST00000428014 ME2P23368 584 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 HTR3AP46098 478 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 IDH3AP50213 366 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 POLR2JP52435 117 aaKnown RBP8.24□□□□□ -1.09
SMC1A-203ENST00000428014 ZNF136P52737 540 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 MVDP53602 400 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 HPCAP84074 193 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 SELENBP1Q13228 472 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 CBFBQ13951 182 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 TOMM20Q15388 145 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 COQ5Q5HYK3 327 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 RAET1LQ5VY80 246 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 FIGNL1Q6PIW4 674 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 CHMP1BQ7LBR1 199 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 C16orf62Q7Z3J2 963 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 SZRD1Q7Z422 152 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 ZNF619Q8N2I2 560 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 SLC43A2Q8N370 569 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 DPP10Q8N608 796 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 BHLHE22Q8NFJ8 381 aaPredicted RBP8.24□□□□□ -1.09
SMC1A-203ENST00000428014 OR5M9Q8NGP3 310 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 GTF2H4Q92759 462 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 CPNE4Q96A23 557 aaPredicted RBP8.24□□□□□ -1.09
SMC1A-203ENST00000428014 ROPN1LQ96C74 230 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 TUBA1CQ9BQE3 449 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 TRIM8Q9BZR9 551 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 OR51I1Q9H343 314 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 PIF1Q9H611 641 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 ARMC7Q9H6L4 198 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 BCL2L10Q9HD36 194 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 FANCFQ9NPI8 374 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 SLC52A3Q9NQ40 469 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 TIGARQ9NQ88 270 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 MED17Q9NVC6 651 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 MED11Q9P086 117 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 CAMK2AQ9UQM7 478 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 WDR45Q9Y484 360 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 PCNX3Q9H6A9 2034 aa8.24□□□□□ -1.09
SMC1A-203ENST00000428014 SPG11Q96JI7 2443 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 MYO9AB2RTY4 2548 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 A0A096LPI6 279 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 A0A1W2PP18 115 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 TMEM247A6NEH6 219 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 DIAPH2O60879 1101 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 SASH3O75995 380 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 CNOT4O95628 575 aaKnown RBP8.23□□□□□ -1.09
SMC1A-203ENST00000428014 DBIP07108 87 aaKnown RBP8.23□□□□□ -1.09
SMC1A-203ENST00000428014 UBL4AP11441 157 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 UQCRBP14927 111 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 ETS2P15036 469 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 PGCP20142 388 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 SOAT1P35610 550 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 CHI3L1P36222 383 aaPredicted RBP8.23□□□□□ -1.09
SMC1A-203ENST00000428014 PGM1P36871 562 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 APOBEC1P41238 236 aaKnown RBP8.23□□□□□ -1.09
SMC1A-203ENST00000428014 CRISP3P54108 245 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 CLDN15P56746 228 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 KCNJ10P78508 379 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 ZNF117Q03924 483 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 SKP2Q13309 424 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 SQLEQ14534 574 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 DAZAP2Q15038 168 aaPredicted RBP8.23□□□□□ -1.09
SMC1A-203ENST00000428014 PDK3Q15120 406 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 RNPS1Q15287 305 aaKnown RBP8.23□□□□□ -1.09
SMC1A-203ENST00000428014 DCST1Q5T197 706 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.23□□□□□ -1.09
SMC1A-203ENST00000428014 RNF220Q5VTB9 566 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 TYW3Q6IPR3 259 aaKnown RBP8.23□□□□□ -1.09
SMC1A-203ENST00000428014 FRRS1Q6ZNA5 592 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 WDR53Q7Z5U6 358 aaPredicted RBP8.23□□□□□ -1.09
SMC1A-203ENST00000428014 ZAR1Q86SH2 424 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 GGNQ86UU5 652 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 RPRMLQ8N4K4 120 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 OR10Q1Q8NGQ4 319 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 GPR119Q8TDV5 335 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 FAM222BQ8WU58 562 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 GMPPAQ96IJ6 420 aaPredicted RBP8.23□□□□□ -1.09
SMC1A-203ENST00000428014 OR52B2Q96RD2 323 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 ZNF385DQ9H6B1 395 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 TPT1P8Q9HAU6 139 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 MCCC2Q9HCC0 563 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 SLCO1B3Q9NPD5 702 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.23□□□□□ -1.09
SMC1A-203ENST00000428014 ACER3Q9NUN7 267 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 ELOVL5Q9NYP7 299 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 P2RX2Q9UBL9 471 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 PACSIN3Q9UKS6 424 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 MCTS1Q9ULC4 181 aaKnown RBP8.23□□□□□ -1.09
SMC1A-203ENST00000428014 EDARQ9UNE0 448 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 IFT52Q9Y366 437 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 ZNF337Q9Y3M9 751 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 SPIN1Q9Y657 262 aaPredicted RBP8.23□□□□□ -1.09
SMC1A-203ENST00000428014 HEATR5AQ86XA9 2040 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 ABCA4P78363 2273 aa8.23□□□□□ -1.09
SMC1A-203ENST00000428014 TRBV5-3A0A0A0MS03 114 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 A0A0G2JPF8 293 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 SLC22A20A6NK97 555 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 A8MXE2 369 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms