RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 ATAD3AQ9NVI7 634 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 TMEM160Q9NX00 188 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 GIN1Q9NXP7 522 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 MID2Q9UJV3 735 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 TMED5Q9Y3A6 229 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ACTL7BQ9Y614 415 aa10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 SPIN1Q9Y657 262 aaPredicted RBP10.9□□□□□ -0.66
HLA-DQB3-203ENST00000425319 ARID1AO14497 2285 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 FAM234BA2RU67 622 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 B4DXG7 233 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ABCD4O14678 606 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 PHF1O43189 567 aaPredicted RBP10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 AKAP10O43572 662 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 EIF4E2O60573 245 aaKnown RBP10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 TBX19O60806 448 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 GLRA3O75311 464 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 F12P00748 615 aaPredicted RBP10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 IGKV1D-16P01601 117 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 IGHV4-39P01824 125 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 DHRS4L1P0CG22 281 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 FKBP2P26885 142 aaKnown RBP10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 FABP6P51161 128 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 SELENBP1Q13228 472 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 CBFBQ13951 182 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 TSC22D1Q15714 1073 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 WHAMMP3Q1A5X7 153 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 TRMT10CQ7L0Y3 403 aaKnown RBP10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 PHC2Q8IXK0 858 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 TMCO5AQ8N6Q1 288 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ZNF614Q8N883 585 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 SLC16A11Q8NCK7 471 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 LILRB1Q8NHL6 650 aaPredicted RBP10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 RFWD2Q8NHY2 731 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ZFP90Q8TF47 636 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 FAM168AQ92567 244 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 KCNA7Q96RP8 456 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 CCT7Q99832 543 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 TRIM2Q9C040 744 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 PIGUQ9H490 435 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 FKRPQ9H9S5 495 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 DUSP22Q9NRW4 184 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 B3GALT5Q9Y2C3 310 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 DSCAMO60469 2012 aa10.89□□□□□ -0.67
HLA-DQB3-203ENST00000425319 DPRXA6NFQ7 191 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 DUXAA6NLW8 204 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ZNF724A8MTY0 619 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 VSTM5A8MXK1 200 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 GPR171O14626 319 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 LYZL6O75951 148 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 LINGO3P0C6S8 592 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 CTAGE8P0CG41 777 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 PSMA4P25789 261 aaKnown RBP10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 TTKP33981 857 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 THBS2P35442 1172 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 HPCAL1P37235 193 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 OR3A2P47893 321 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 LOXL1Q08397 574 aaPredicted RBP10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ZNF844Q08AG5 666 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 FOXF1Q12946 379 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 PGGHGQ32M88 737 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 C1QTNF12Q5T7M4 302 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 OR7E24Q6IFN5 339 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 Q6ZSR9 355 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 DTX2Q86UW9 622 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 CTAGE4Q8IX94 777 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 KBTBD8Q8NFY9 601 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 OR56A1Q8NGH5 318 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 PROX1Q92786 737 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 MOAP1Q96BY2 351 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 OR5B2Q96R09 309 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 DHRS9Q9BPW9 319 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ACTRT3Q9BYD9 372 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 BCO1Q9HAY6 547 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 NTMQ9P121 344 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 PYCARDQ9ULZ3 195 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 CARD8Q9Y2G2 431 aa10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 FN1P02751 2386 aaKnown RBP10.88□□□□□ -0.67
HLA-DQB3-203ENST00000425319 MED12LQ86YW9 2145 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 JMJD1CQ15652 2540 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 GOLGA8RI6L899 631 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 CFLARO15519 480 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ZNF264O43296 627 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ABHD2P08910 425 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 TFPIP10646 304 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ACP2P11117 423 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 PGCP20142 388 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 PRPH2P23942 346 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 MAP3K8P41279 467 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 CCT3P49368 545 aaKnown RBP10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 GZMKP49863 264 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 CCR4P51679 360 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ATP12AP54707 1039 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 CASP9P55211 416 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 C21orf58P58505 322 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 TGFBR3Q03167 851 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 KRTAP1-1Q07627 177 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 MLC1Q15049 377 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 DUSP5Q16690 384 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 TMEM249Q2WGJ8 235 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ZNF544Q6NX49 715 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms