RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 BPHLQ86WA6 291 aaPredicted RBP24.38■■□□□ 1.49
LDB1-202ENST00000425280 STX19Q8N4C7 294 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 FAM26EQ8N5C1 309 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 OIT3Q8WWZ8 545 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 OSTF1Q92882 214 aa24.38■■□□□ 1.49
LDB1-202ENST00000425280 CNOT2Q9NZN8 540 aaKnown RBP24.38■■□□□ 1.49
LDB1-202ENST00000425280 MRTO4Q9UKD2 239 aaKnown RBP24.38■■□□□ 1.49
LDB1-202ENST00000425280 CDC14CA4D256 554 aa24.37■■□□□ 1.49
LDB1-202ENST00000425280 EFCAB10A6NFE3 127 aa24.37■■□□□ 1.49
LDB1-202ENST00000425280 TLX2O43763 284 aaPredicted RBP24.37■■□□□ 1.49
LDB1-202ENST00000425280 TRMUO75648 421 aaKnown RBP24.37■■□□□ 1.49
LDB1-202ENST00000425280 IFI30P13284 250 aa24.37■■□□□ 1.49
LDB1-202ENST00000425280 MAKP20794 623 aa24.37■■□□□ 1.49
LDB1-202ENST00000425280 GPR143P51810 404 aa24.37■■□□□ 1.49
LDB1-202ENST00000425280 TMBIM6P55061 237 aa24.37■■□□□ 1.49
LDB1-202ENST00000425280 LSAMPQ13449 338 aa24.37■■□□□ 1.49
LDB1-202ENST00000425280 IL11RAQ14626 422 aa24.37■■□□□ 1.49
LDB1-202ENST00000425280 CLEC12AQ5QGZ9 265 aa24.37■■□□□ 1.49
LDB1-202ENST00000425280 SYT6Q5T7P8 510 aaPredicted RBP24.37■■□□□ 1.49
LDB1-202ENST00000425280 LCN10Q6JVE6 187 aa24.37■■□□□ 1.49
LDB1-202ENST00000425280 SLC29A4Q7RTT9 530 aa24.37■■□□□ 1.49
LDB1-202ENST00000425280 BCDIN3DQ7Z5W3 292 aaKnown RBP24.37■■□□□ 1.49
LDB1-202ENST00000425280 AMER2Q8N7J2 671 aa24.37■■□□□ 1.49
LDB1-202ENST00000425280 ZNF527Q8NB42 609 aa24.37■■□□□ 1.49
LDB1-202ENST00000425280 FGF11Q92914 225 aa24.37■■□□□ 1.49
LDB1-202ENST00000425280 LOXL4Q96JB6 756 aa24.37■■□□□ 1.49
LDB1-202ENST00000425280 MESP1Q9BRJ9 268 aa24.37■■□□□ 1.49
LDB1-202ENST00000425280 TSSK6Q9BXA6 273 aa24.37■■□□□ 1.49
LDB1-202ENST00000425280 DPH1Q9BZG8 443 aa24.37■■□□□ 1.49
LDB1-202ENST00000425280 ATP13A2Q9NQ11 1180 aa24.37■■□□□ 1.49
LDB1-202ENST00000425280 TBC1D23Q9NUY8 699 aa24.37■■□□□ 1.49
LDB1-202ENST00000425280 VSTM2BA6NLU5 285 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 OR6C76A6NM76 312 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 KPNA4O00629 521 aaPredicted RBP24.36■■□□□ 1.49
LDB1-202ENST00000425280 NR0B1P51843 470 aaKnown RBP24.36■■□□□ 1.49
LDB1-202ENST00000425280 SNAPC1Q16533 368 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 KIRREL2Q6UWL6 708 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 ERI1Q8IV48 349 aaKnown RBP24.36■■□□□ 1.49
LDB1-202ENST00000425280 BMPERQ8N8U9 685 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 FAM71CQ8NEG0 241 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 HS6ST2Q96MM7 605 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 ADOQ96SZ5 270 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 MED31Q9Y3C7 131 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 CDH10Q9Y6N8 788 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 UNC119BA6NIH7 251 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 TO15178 435 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 CNOT3O75175 753 aaKnown RBP24.36■■□□□ 1.49
LDB1-202ENST00000425280 ATE1O95260 518 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 LCKP06239 509 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 ADH7P40394 386 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 CD226Q15762 336 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 ALG10BQ5I7T1 473 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 SLC25A30Q5SVS4 291 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 UBE2UQ5VVX9 321 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 CADM2Q8N3J6 435 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 CLDN22Q8N7P3 220 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 GATSQ8NAP1 163 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 AGBL5Q8NDL9 886 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 ZNF426Q9BUY5 554 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 FUNDC2Q9BWH2 189 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 MEPEQ9NQ76 525 aaPredicted RBP24.36■■□□□ 1.49
LDB1-202ENST00000425280 PCDHGB2Q9Y5G2 931 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 PCDHGA5Q9Y5G8 931 aa24.36■■□□□ 1.49
LDB1-202ENST00000425280 ALOX12BO75342 701 aa24.35■■□□□ 1.49
LDB1-202ENST00000425280 HPGDP15428 266 aa24.35■■□□□ 1.49
LDB1-202ENST00000425280 TBCEQ15813 527 aaPredicted RBP24.35■■□□□ 1.49
LDB1-202ENST00000425280 APOOLQ6UXV4 268 aa24.35■■□□□ 1.49
LDB1-202ENST00000425280 BMP8AQ7Z5Y6 402 aa24.35■■□□□ 1.49
LDB1-202ENST00000425280 ZNF441Q8N8Z8 693 aa24.35■■□□□ 1.49
LDB1-202ENST00000425280 OR4Q3Q8NH05 313 aa24.35■■□□□ 1.49
LDB1-202ENST00000425280 WDR36Q8NI36 951 aaKnown RBP24.35■■□□□ 1.49
LDB1-202ENST00000425280 WDFY4Q6ZS81 3184 aa24.35■■□□□ 1.49
LDB1-202ENST00000425280 SCDO00767 359 aa24.34■■□□□ 1.49
LDB1-202ENST00000425280 REM1O75628 298 aa24.34■■□□□ 1.49
LDB1-202ENST00000425280 ADRA2AP08913 450 aa24.34■■□□□ 1.49
LDB1-202ENST00000425280 PIPP12273 146 aaPredicted RBP24.34■■□□□ 1.49
LDB1-202ENST00000425280 FUT1P19526 365 aa24.34■■□□□ 1.49
LDB1-202ENST00000425280 TBXA2RP21731 343 aa24.34■■□□□ 1.49
LDB1-202ENST00000425280 ACP1P24666 158 aa24.34■■□□□ 1.49
LDB1-202ENST00000425280 PSMB9P28065 219 aa24.34■■□□□ 1.49
LDB1-202ENST00000425280 DESI1Q6ICB0 168 aa24.34■■□□□ 1.49
LDB1-202ENST00000425280 ZNF440Q8IYI8 595 aa24.34■■□□□ 1.49
LDB1-202ENST00000425280 BPIFA2Q96DR5 249 aa24.34■■□□□ 1.49
LDB1-202ENST00000425280 TMEM5Q9Y2B1 443 aa24.34■■□□□ 1.49
LDB1-202ENST00000425280 NOL3O60936 208 aaKnown RBP24.34■■□□□ 1.49
LDB1-202ENST00000425280 RFPL3O75679 317 aa24.34■■□□□ 1.49
LDB1-202ENST00000425280 GP1BAP07359 652 aa24.34■■□□□ 1.49
LDB1-202ENST00000425280 RBM34P42696 430 aaKnown RBP24.34■■□□□ 1.49
LDB1-202ENST00000425280 CTBP2P56545 445 aa24.34■■□□□ 1.49
LDB1-202ENST00000425280 IRF3Q14653 427 aa24.34■■□□□ 1.49
LDB1-202ENST00000425280 SYT14P1Q58G82 188 aa24.34■■□□□ 1.49
LDB1-202ENST00000425280 SLC30A6Q6NXT4 461 aa24.34■■□□□ 1.49
LDB1-202ENST00000425280 ULK3Q6PHR2 472 aa24.34■■□□□ 1.49
LDB1-202ENST00000425280 LINC00114Q6XXX2 140 aa24.34■■□□□ 1.49
LDB1-202ENST00000425280 TMPRSS11FQ6ZWK6 438 aa24.34■■□□□ 1.49
LDB1-202ENST00000425280 RHBDD1Q8TEB9 315 aa24.34■■□□□ 1.49
LDB1-202ENST00000425280 RPS6KB2Q9UBS0 482 aa24.34■■□□□ 1.49
LDB1-202ENST00000425280 LNP1A1A4G5 178 aa24.33■■□□□ 1.49
LDB1-202ENST00000425280 MEN1O00255 615 aa24.33■■□□□ 1.49
LDB1-202ENST00000425280 OIP5O43482 229 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms