RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 CT45A2Q5DJT8 189 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 DCST1Q5T197 706 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 AMER2Q8N7J2 671 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 WDR36Q8NI36 951 aaKnown RBP13.85□□□□□ -0.19
CALD1-206ENST00000424922 C9orf43Q8TAL5 461 aaPredicted RBP13.85□□□□□ -0.19
CALD1-206ENST00000424922 GTPBP3Q969Y2 492 aaKnown RBP13.85□□□□□ -0.19
CALD1-206ENST00000424922 HSPBAP1Q96EW2 488 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 UCK2Q9BZX2 261 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 TRBV4-1A0A0J9YWV2 114 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 EFCAB10A6NFE3 127 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.85□□□□□ -0.19
CALD1-206ENST00000424922 STX11O75558 287 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 SOX30O94993 753 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 KCNK2O95069 426 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 ALPPP05187 535 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 CD36P16671 472 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 FUT4P22083 530 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 NR4A1P22736 598 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 CHMP24386 653 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 ELAVL4P26378 380 aaKnown RBP13.85□□□□□ -0.19
CALD1-206ENST00000424922 CAMK2BQ13554 666 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 ZNF846Q147U1 533 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 NCF4Q15080 339 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 LINC00471Q8N535 108 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 SLC15A4Q8N697 577 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 DYNC2LI1Q8TCX1 351 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 S100ZQ8WXG8 99 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 SH3YL1Q96HL8 342 aaPredicted RBP13.85□□□□□ -0.19
CALD1-206ENST00000424922 ART5Q96L15 291 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 SLC46A1Q96NT5 459 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 ZNF350Q9GZX5 532 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 MTHFD2LQ9H903 347 aaPredicted RBP13.85□□□□□ -0.19
CALD1-206ENST00000424922 Q9N2J8 555 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 COPS7AQ9UBW8 275 aa13.85□□□□□ -0.19
CALD1-206ENST00000424922 NXT1Q9UKK6 140 aaKnown RBP13.85□□□□□ -0.19
CALD1-206ENST00000424922 NDUFB5O43674 189 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 AK1P00568 194 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 UGT2B10P36537 528 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 GSSP48637 474 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 TARDBPQ13148 414 aaKnown RBP eCLIP13.84□□□□□ -0.19
CALD1-206ENST00000424922 DGCR6Q14129 220 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 ZNF311Q5JNZ3 666 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 TMEM164Q5U3C3 297 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 C6orf15Q6UXA7 325 aaPredicted RBP13.84□□□□□ -0.19
CALD1-206ENST00000424922 COMTD1Q86VU5 262 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 VRK2Q86Y07 508 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 MORN4Q8NDC4 146 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 OR1N1Q8NGS0 311 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 C8orf44Q96CB5 159 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 WDR12Q9GZL7 423 aaKnown RBP13.84□□□□□ -0.19
CALD1-206ENST00000424922 CLN6Q9NWW5 311 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 FOXJ2Q9P0K8 574 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 RHCGQ9UBD6 479 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 REV1Q9UBZ9 1251 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 PADI1Q9ULC6 663 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 PTRH2Q9Y3E5 179 aaKnown RBP13.84□□□□□ -0.19
CALD1-206ENST00000424922 OR10H1Q9Y4A9 318 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 CLDN25C9JDP6 229 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 SEMA7AO75326 666 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 KLF7O75840 302 aaPredicted RBP13.84□□□□□ -0.19
CALD1-206ENST00000424922 CCNYL3P0C7X3 344 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 PIPP12273 146 aaPredicted RBP13.84□□□□□ -0.19
CALD1-206ENST00000424922 SNRPGP62308 76 aaKnown RBP13.84□□□□□ -0.19
CALD1-206ENST00000424922 ANKDD1AQ495B1 522 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 TIPARPQ7Z3E1 657 aaKnown RBP13.84□□□□□ -0.19
CALD1-206ENST00000424922 MARCH9Q86YJ5 346 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 OR4D11Q8NGI4 311 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 OR52P1PQ8NH57 321 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 LGALS12Q96DT0 336 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 GAL3ST4Q96RP7 486 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 CDCA4Q9BXL8 241 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 HMG20AQ9NP66 347 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 CFL2Q9Y281 166 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 SLC9A8Q9Y2E8 581 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 GPR55Q9Y2T6 319 aaPredicted RBP13.84□□□□□ -0.19
CALD1-206ENST00000424922 PCDHGA3Q9Y5H0 932 aa13.84□□□□□ -0.19
CALD1-206ENST00000424922 NPIPA5A0A0B4J1W7 369 aa13.83□□□□□ -0.2
CALD1-206ENST00000424922 A0A1W2PRQ8 180 aa13.83□□□□□ -0.2
CALD1-206ENST00000424922 NPIPA7E9PJI5 369 aa13.83□□□□□ -0.2
CALD1-206ENST00000424922 M0R082 166 aa13.83□□□□□ -0.2
CALD1-206ENST00000424922 BRINP1O60477 761 aa13.83□□□□□ -0.2
CALD1-206ENST00000424922 DLGAP3O95886 979 aa13.83□□□□□ -0.2
CALD1-206ENST00000424922 IGKV1D-16P01601 117 aa13.83□□□□□ -0.2
CALD1-206ENST00000424922 NPIPA8P0DM63 369 aa13.83□□□□□ -0.2
CALD1-206ENST00000424922 POU2F1P14859 743 aa13.83□□□□□ -0.2
CALD1-206ENST00000424922 CSRP1P21291 193 aaKnown RBP13.83□□□□□ -0.2
CALD1-206ENST00000424922 C21orf33P30042 268 aaPredicted RBP13.83□□□□□ -0.2
CALD1-206ENST00000424922 TRHRP34981 398 aaPredicted RBP13.83□□□□□ -0.2
CALD1-206ENST00000424922 OPRL1P41146 370 aa13.83□□□□□ -0.2
CALD1-206ENST00000424922 UGT2B15P54855 530 aa13.83□□□□□ -0.2
CALD1-206ENST00000424922 TUBA1BP68363 451 aa13.83□□□□□ -0.2
CALD1-206ENST00000424922 ALDH6A1Q02252 535 aaKnown RBP13.83□□□□□ -0.2
CALD1-206ENST00000424922 TMEM201Q5SNT2 666 aa13.83□□□□□ -0.2
CALD1-206ENST00000424922 SLX4IPQ5VYV7 408 aa13.83□□□□□ -0.2
CALD1-206ENST00000424922 TMEM205Q6UW68 189 aa13.83□□□□□ -0.2
CALD1-206ENST00000424922 CD300LDQ6UXZ3 194 aa13.83□□□□□ -0.2
CALD1-206ENST00000424922 TUBA1AQ71U36 451 aa13.83□□□□□ -0.2
CALD1-206ENST00000424922 CPEB2Q7Z5Q1 589 aaKnown RBP13.83□□□□□ -0.2
CALD1-206ENST00000424922 ZAR1Q86SH2 424 aa13.83□□□□□ -0.2
CALD1-206ENST00000424922 C9orf40Q8IXQ3 194 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms