RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 OR52N1Q8NH53 320 aa10.52□□□□□ -0.72
SEC61A1-202ENST00000424880 ZNF75AQ96N20 296 aa10.52□□□□□ -0.72
SEC61A1-202ENST00000424880 UBL7Q96S82 380 aaPredicted RBP10.52□□□□□ -0.72
SEC61A1-202ENST00000424880 MICU1Q9BPX6 476 aa10.52□□□□□ -0.72
SEC61A1-202ENST00000424880 ZNF649Q9BS31 505 aa10.52□□□□□ -0.72
SEC61A1-202ENST00000424880 HRASLSQ9HDD0 168 aa10.52□□□□□ -0.72
SEC61A1-202ENST00000424880 EQTNQ9NQ60 294 aa10.52□□□□□ -0.72
SEC61A1-202ENST00000424880 ZNF230Q9UIE0 474 aaPredicted RBP10.52□□□□□ -0.72
SEC61A1-202ENST00000424880 FBXL4Q9UKA2 621 aa10.52□□□□□ -0.72
SEC61A1-202ENST00000424880 CA5BQ9Y2D0 317 aa10.52□□□□□ -0.72
SEC61A1-202ENST00000424880 PSMD9O00233 223 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 SULT1C2O00338 296 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 GPR37L1O60883 481 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 PSMB1P20618 241 aaKnown RBP10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 PSMA3P25788 255 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 ASMTP46597 345 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 SP140Q13342 867 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 POM121L1PQ3SYA9 428 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 MINDY4Q4G0A6 757 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 B3GNTL1Q67FW5 361 aaPredicted RBP10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 RFLNBQ8N5W9 214 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 ZNF433Q8N7K0 673 aaPredicted RBP10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 C16orf78Q8WTQ4 265 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 C3orf49Q96BT1 292 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 CPNE2Q96FN4 548 aaPredicted RBP10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 C10orf90Q96M02 699 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 NKX3-1Q99801 234 aaPredicted RBP10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 ALG8Q9BVK2 526 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 FBXO44Q9H4M3 255 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 TMEM138Q9NPI0 162 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 GSN-AS1Q9NRJ2 163 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 MARK1Q9P0L2 795 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 TAAR2Q9P1P5 351 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 EXOSC1Q9Y3B2 195 aaKnown RBP10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 LRRN3E7EW58 273 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 GOSR2O14653 212 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 GNB5O14775 395 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 ADAMTS4O75173 837 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 PRKRAO75569 313 aaKnown RBP10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 ELNP15502 786 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 OR12D2P58182 307 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 UBE2IP63279 158 aaKnown RBP10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 ZNF528Q3MIS6 628 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 OR5W2Q8NH69 310 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 AUTS2Q8WXX7 1259 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 FGF11Q92914 225 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 TEFMQ96QE5 360 aaKnown RBP10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 DNTTIP1Q9H147 329 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 LRRN3Q9H3W5 708 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 FGF20Q9NP95 211 aaPredicted RBP10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 HINT3Q9NQE9 182 aaKnown RBP10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 H2AFY2Q9P0M6 372 aaPredicted RBP10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 HCSTQ9UBK5 93 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 LHX3Q9UBR4 397 aa10.52□□□□□ -0.73
SEC61A1-202ENST00000424880 PDHA2P29803 388 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 CORO1AP31146 461 aaKnown RBP10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 AKR1C3P42330 323 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 KCNJ5P48544 419 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 CCR9P51686 369 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 RPS15P62841 145 aaKnown RBP10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 MRPS6P82932 125 aaKnown RBP10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 SRSF3P84103 164 aaKnown RBP10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 SREBF2Q12772 1141 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 KLF9Q13886 244 aaPredicted RBP10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 MRPL58Q14197 206 aaKnown RBP10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 MICBQ29980 383 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 KIAA1211LQ6NV74 962 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 NDUFAF7Q7L592 441 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 APCDD1Q8J025 514 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 OR51L1Q8NGJ5 315 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 OR6S1Q8NH40 331 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 LGALS14Q8TCE9 139 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 GNPDA2Q8TDQ7 276 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 SORCS1Q8WY21 1168 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 ENKD1Q9H0I2 346 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 SLC25A18Q9H1K4 315 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 WDR13Q9H1Z4 485 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 RNF186Q9NXI6 227 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 PLEKHM1Q9Y4G2 1056 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 A0A0G2JK05 382 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 HMGN4O00479 90 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 ST8SIA5O15466 376 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 GALR3O60755 368 aaPredicted RBP10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 KLHL18O94889 574 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 RASGRP1O95267 797 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 CRYBA1P05813 215 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 NR2F1P10589 423 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 PYCR1P32322 319 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 EFNB1P98172 346 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 Q3ZCU0 254 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 C6orf120Q7Z4R8 191 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 CYB561A3Q8NBI2 242 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 PXT1Q8NFP0 134 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 ZNF354BQ96LW1 612 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 GAREM1Q9H706 876 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 C14orf105Q9NVL8 296 aa10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 GPR55Q9Y2T6 319 aaPredicted RBP10.51□□□□□ -0.73
SEC61A1-202ENST00000424880 A0A087WV48 116 aa10.5□□□□□ -0.73
SEC61A1-202ENST00000424880 LRIT2A6NDA9 550 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms