RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 MRM2Q9UI43 246 aaKnown RBP3.31□□□□□ -1.88
SF3B1-205ENST00000424674 KIF25Q9UIL4 384 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 NUP50Q9UKX7 468 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 FZR1Q9UM11 496 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 SCML1Q9UN30 329 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 MEMO1Q9Y316 297 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 LRRC42Q9Y546 428 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 FKBP7Q9Y680 259 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 SAR1BQ9Y6B6 198 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 CDH10Q9Y6N8 788 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 CACNA1IQ9P0X4 2223 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 AQRO60306 1485 aaKnown RBP eCLIP3.3□□□□□ -1.882e-6■■□□□ 13.2
SF3B1-205ENST00000424674 SNED1Q8TER0 1413 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 ANKRD30AQ9BXX3 1397 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 CNTNAP2Q9UHC6 1331 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 GOLGA6L9A6NEM1 432 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 E5RI56 91 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 PROB1E7EW31 1015 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 H0YL77 283 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 CCSO14618 274 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 SIVA1O15304 175 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 TAPBPO15533 448 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 XRCC2O43543 280 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 SH3BGRLO75368 114 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 KRT33AO76009 404 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 SCELO95171 688 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 LRATO95237 230 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 FARS2O95363 451 aaKnown RBP3.3□□□□□ -1.88
SF3B1-205ENST00000424674 RAB3DO95716 219 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 NR3C1P04150 777 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 IFNA6P05013 189 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 H1F0P07305 194 aaKnown RBP3.3□□□□□ -1.88
SF3B1-205ENST00000424674 KRT16P08779 473 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 CTXN2P0C2S0 81 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 ANXA3P12429 323 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 CD59P13987 128 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 IMPDH1P20839 514 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 CBLP22681 906 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 CFL1P23528 166 aaKnown RBP3.3□□□□□ -1.88
SF3B1-205ENST00000424674 HNRNPH1P31943 449 aaKnown RBP3.3□□□□□ -1.88
SF3B1-205ENST00000424674 CCKBRP32239 447 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 HPCAL1P37235 193 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 SLC1A2P43004 574 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 NKX2-1P43699 371 aaPredicted RBP3.3□□□□□ -1.88
SF3B1-205ENST00000424674 P2RY1P47900 373 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 SERPINB9P50453 376 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 MNAT1P51948 309 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 OR2B6P58173 313 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 RPL10AP62906 217 aaKnown RBP3.3□□□□□ -1.88
SF3B1-205ENST00000424674 CX3CL1P78423 397 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 MRPS6P82932 125 aaKnown RBP3.3□□□□□ -1.88
SF3B1-205ENST00000424674 EWSR1Q01844 656 aaKnown RBP eCLIP3.3□□□□□ -1.88
SF3B1-205ENST00000424674 MFGE8Q08431 387 aaPredicted RBP3.3□□□□□ -1.88
SF3B1-205ENST00000424674 RBBP4Q09028 425 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 TSPAN31Q12999 210 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 C1orf61Q13536 156 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 ALX1Q15699 326 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 SLC15A2Q16348 729 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 MRPL23Q16540 153 aaKnown RBP3.3□□□□□ -1.88
SF3B1-205ENST00000424674 KLHL38Q2WGJ6 581 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 ZNF699Q32M78 642 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 AKIRIN2Q53H80 203 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 ENTPD8Q5MY95 495 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 CELF3Q5SZQ8 465 aaKnown RBP3.3□□□□□ -1.88
SF3B1-205ENST00000424674 PRAMEF17Q5VTA0 474 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 C1orf189Q5VU69 101 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 SLC22A10Q63ZE4 541 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 C22orf42Q6IC83 251 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 SLC27A4Q6P1M0 643 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 UQCC3Q6UW78 93 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 SHFQ7M4L6 423 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 ZNF367Q7RTV3 350 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 COX8CQ7Z4L0 72 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 NET1Q7Z628 596 aaPredicted RBP3.3□□□□□ -1.88
SF3B1-205ENST00000424674 YTHDF3Q7Z739 585 aaKnown RBP3.3□□□□□ -1.88
SF3B1-205ENST00000424674 TRIM69Q86WT6 500 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 CATSPERDQ86XM0 798 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 MAP7D3Q8IWC1 876 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 CDK20Q8IZL9 346 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 ZNF786Q8N393 782 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 PARP8Q8N3A8 854 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 FGFRL1Q8N441 504 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 CPSF7Q8N684 471 aaKnown RBP3.3□□□□□ -1.88
SF3B1-205ENST00000424674 ARFGAP1Q8N6T3 406 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 ARL14EPQ8N8R7 260 aaPredicted RBP3.3□□□□□ -1.88
SF3B1-205ENST00000424674 TERB1Q8NA31 727 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 LRRC75AQ8NAA5 344 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 C9orf106Q8NAJ2 232 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 DMBX1Q8NFW5 382 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 OR10A7Q8NGE5 316 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 GPR151Q8TDV0 419 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 NUDCD2Q8WVJ2 157 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 ACOT11Q8WXI4 607 aaPredicted RBP3.3□□□□□ -1.88
SF3B1-205ENST00000424674 NR4A3Q92570 626 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 RPL36ALQ969Q0 106 aaKnown RBP3.3□□□□□ -1.88
SF3B1-205ENST00000424674 CPNE4Q96A23 557 aaPredicted RBP3.3□□□□□ -1.88
SF3B1-205ENST00000424674 DUS3LQ96G46 650 aaKnown RBP3.3□□□□□ -1.88
SF3B1-205ENST00000424674 CEP19Q96LK0 163 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 C12orf42Q96LP6 360 aa3.3□□□□□ -1.88
SF3B1-205ENST00000424674 UHRF2Q96PU4 802 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms