RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 GMPPAQ96IJ6 420 aaPredicted RBP16.52■□□□□ 0.24
NUP50-207ENST00000424634 KLHL15Q96M94 604 aa16.52■□□□□ 0.24
NUP50-207ENST00000424634 PAIP2Q9BPZ3 127 aaKnown RBP16.52■□□□□ 0.24
NUP50-207ENST00000424634 SLC39A3Q9BRY0 314 aa16.52■□□□□ 0.24
NUP50-207ENST00000424634 MEAF6Q9HAF1 191 aa16.52■□□□□ 0.24
NUP50-207ENST00000424634 PAQR5Q9NXK6 330 aaPredicted RBP16.52■□□□□ 0.24
NUP50-207ENST00000424634 MCTS1Q9ULC4 181 aaKnown RBP16.52■□□□□ 0.24
NUP50-207ENST00000424634 EDARQ9UNE0 448 aa16.52■□□□□ 0.24
NUP50-207ENST00000424634 FLNAP21333 2647 aaKnown RBP16.51■□□□□ 0.23
NUP50-207ENST00000424634 FREM1Q5H8C1 2179 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 CENPVL1A0A0U1RR11 272 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 RNF103-CHMP3A0A140T963 221 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 PRSS51A0A1B0GVH4 220 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 ESPNB1AK53 854 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 C16orf97H3BN30 126 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 H3BNH8 94 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 GTPBP1O00178 669 aaKnown RBP16.51■□□□□ 0.23
NUP50-207ENST00000424634 ZNF195O14628 629 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 SS18L1O75177 396 aaPredicted RBP16.51■□□□□ 0.23
NUP50-207ENST00000424634 CPSF4O95639 269 aaKnown RBP16.51■□□□□ 0.23
NUP50-207ENST00000424634 NUDT14O95848 222 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 C1QCP02747 245 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 LBPP18428 481 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 SFTPDP35247 375 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 EIF1P41567 113 aaKnown RBP16.51■□□□□ 0.23
NUP50-207ENST00000424634 KCNJ5P48544 419 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 CARD18P57730 90 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 PDZK1Q5T2W1 519 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 ANKRD34AQ69YU3 496 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 TGIF2LYQ8IUE0 185 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 ZNF614Q8N883 585 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 OR4A15Q8NGL6 344 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 OR6K3Q8NGY3 331 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 ROBO4Q8WZ75 1007 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 TESCQ96BS2 214 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 SLC35G5Q96KT7 338 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 TEX37Q96LM6 180 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 ALPK1Q96QP1 1244 aa16.51■□□□□ 0.23
NUP50-207ENST00000424634 ROS1P08922 2347 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 DUXAA6NLW8 204 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 SYNGR4O95473 234 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 NTN1O95631 604 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 ALDOCP09972 364 aaKnown RBP16.5■□□□□ 0.23
NUP50-207ENST00000424634 PRKCAP17252 672 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 CD53P19397 219 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 ME2P23368 584 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 ADH6P28332 368 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 SUMO3P55854 103 aaPredicted RBP16.5■□□□□ 0.23
NUP50-207ENST00000424634 KEAP1Q14145 624 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 CASP8Q14790 479 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 GPR68Q15743 365 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 ZNF141Q15928 474 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 EXOC3L2Q2M3D2 409 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 ARHGAP11BQ3KRB8 267 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 SPANXN4Q5MJ08 99 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 HEPHL1Q6MZM0 1159 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 ANKRD42Q8N9B4 389 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 RFWD2Q8NHY2 731 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 MIPOL1Q8TD10 442 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 ARSGQ96EG1 525 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 MARK4Q96L34 752 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 MED18Q9BUE0 208 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 SRXN1Q9BYN0 137 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 KLHL4Q9C0H6 718 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 NMUR2Q9GZQ4 415 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 OR51I1Q9H343 314 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 MKLN1Q9UL63 735 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 PCDHGB4Q9UN71 923 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 EMC9Q9Y3B6 208 aa16.5■□□□□ 0.23
NUP50-207ENST00000424634 GPC6Q9Y625 555 aaPredicted RBP16.5■□□□□ 0.23
NUP50-207ENST00000424634 SERINC4A6NH21 518 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 SDHDO14521 159 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 ZNF264O43296 627 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 EIF4E2O60573 245 aaKnown RBP16.49■□□□□ 0.23
NUP50-207ENST00000424634 UGT2B17O75795 530 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 PLGP00747 810 aaPredicted RBP16.49■□□□□ 0.23
NUP50-207ENST00000424634 OR12D1P0DN82 309 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 CD99P14209 185 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 KLK2P20151 261 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 UQCRC2P22695 453 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 CRYGSP22914 178 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 ELK4P28324 431 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 CTBP2P56545 445 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 NME5P56597 212 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 UFM1P61960 85 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 MAPK14Q16539 360 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 DEFB113Q30KQ7 82 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 TMEM176BQ3YBM2 270 aaPredicted RBP16.49■□□□□ 0.23
NUP50-207ENST00000424634 SLC25A53Q5H9E4 307 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 PDSS1Q5T2R2 415 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 ANXA8L1Q5VT79 327 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 HHATQ5VTY9 493 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 OGFOD2Q6N063 350 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 CROCCP2Q86T23 111 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 LRRC34Q8IZ02 419 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 ATP6V1C2Q8NEY4 427 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 OR5W2Q8NH69 310 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 RAB8BQ92930 207 aa16.49■□□□□ 0.23
NUP50-207ENST00000424634 ZC3HAV1LQ96H79 300 aaKnown RBP16.49■□□□□ 0.23
NUP50-207ENST00000424634 NIPBLQ6KC79 2804 aaeCLIP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms