RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 UBQLN2Q9UHD9 624 aa14.15□□□□□ -0.14
C9orf3-204ENST00000424143 FBXL3Q9UKT7 428 aa14.15□□□□□ -0.14
C9orf3-204ENST00000424143 SPATA2Q9UM82 520 aa14.15□□□□□ -0.14
C9orf3-204ENST00000424143 TBC1D3EA0A087X179 549 aa14.14□□□□□ -0.15
C9orf3-204ENST00000424143 PRR23D1E9PI22 279 aaPredicted RBP14.14□□□□□ -0.15
C9orf3-204ENST00000424143 CDC42EP2O14613 210 aa14.14□□□□□ -0.15
C9orf3-204ENST00000424143 ERI3O43414 337 aaKnown RBP14.14□□□□□ -0.15
C9orf3-204ENST00000424143 SULT1B1O43704 296 aa14.14□□□□□ -0.15
C9orf3-204ENST00000424143 ECDO95905 644 aaPredicted RBP14.14□□□□□ -0.15
C9orf3-204ENST00000424143 DBIP07108 87 aaKnown RBP14.14□□□□□ -0.15
C9orf3-204ENST00000424143 RHOP08100 348 aa14.14□□□□□ -0.15
C9orf3-204ENST00000424143 HNRNPA1P09651 372 aaKnown RBP eCLIP14.14□□□□□ -0.15
C9orf3-204ENST00000424143 PRR23D2P0DMB1 279 aaPredicted RBP14.14□□□□□ -0.15
C9orf3-204ENST00000424143 POU3F3P20264 500 aaPredicted RBP14.14□□□□□ -0.15
C9orf3-204ENST00000424143 MC3RP41968 323 aa14.14□□□□□ -0.15
C9orf3-204ENST00000424143 PDX1P52945 283 aa14.14□□□□□ -0.15
C9orf3-204ENST00000424143 TAGLNQ01995 201 aaKnown RBP14.14□□□□□ -0.15
C9orf3-204ENST00000424143 ACSM3Q53FZ2 586 aa14.14□□□□□ -0.15
C9orf3-204ENST00000424143 LYPD4Q6UWN0 246 aa14.14□□□□□ -0.15
C9orf3-204ENST00000424143 UNQ9370/PRO34162Q6UXP9 181 aa14.14□□□□□ -0.15
C9orf3-204ENST00000424143 ZNF836Q6ZNA1 936 aa14.14□□□□□ -0.15
C9orf3-204ENST00000424143 MEX3DQ86XN8 651 aaKnown RBP14.14□□□□□ -0.15
C9orf3-204ENST00000424143 SIAH3Q8IW03 269 aa14.14□□□□□ -0.15
C9orf3-204ENST00000424143 OR11H4Q8NGC9 324 aa14.14□□□□□ -0.15
C9orf3-204ENST00000424143 FANK1Q8TC84 345 aa14.14□□□□□ -0.15
C9orf3-204ENST00000424143 LRRC20Q8TCA0 184 aa14.14□□□□□ -0.15
C9orf3-204ENST00000424143 SMIM4Q8WVI0 70 aa14.14□□□□□ -0.15
C9orf3-204ENST00000424143 NXPE2Q96DL1 559 aa14.14□□□□□ -0.15
C9orf3-204ENST00000424143 C10orf90Q96M02 699 aa14.14□□□□□ -0.15
C9orf3-204ENST00000424143 NECTIN4Q96NY8 510 aa14.14□□□□□ -0.15
C9orf3-204ENST00000424143 QRSL1Q9H0R6 528 aaKnown RBP14.14□□□□□ -0.15
C9orf3-204ENST00000424143 MRPS30Q9NP92 439 aaKnown RBP14.14□□□□□ -0.15
C9orf3-204ENST00000424143 DLL4Q9NR61 685 aa14.14□□□□□ -0.15
C9orf3-204ENST00000424143 C14orf105Q9NVL8 296 aa14.14□□□□□ -0.15
C9orf3-204ENST00000424143 ZNF222Q9UK12 451 aa14.14□□□□□ -0.15
C9orf3-204ENST00000424143 ZMIZ1Q9ULJ6 1067 aa14.14□□□□□ -0.15
C9orf3-204ENST00000424143 SPEF1Q9Y4P9 236 aa14.14□□□□□ -0.15
C9orf3-204ENST00000424143 UTRNP46939 3433 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 C1QTNF3-AMACRE9PGA6 284 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 FRS3O43559 492 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 PTP4A3O75365 173 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 RRASP10301 218 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 CLCNKAP51800 687 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 FXYD6P3P58550 94 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 SNTA1Q13424 505 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 MADCAM1Q13477 382 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 LGALSLQ3ZCW2 172 aaPredicted RBP14.13□□□□□ -0.15
C9orf3-204ENST00000424143 CDONQ4KMG0 1287 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 C1orf53Q5VUE5 145 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 ZNF425Q6IV72 752 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 ZCCHC12Q6PEW1 402 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 ARL9Q6T311 187 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 ADGRG3Q86Y34 549 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 CDK20Q8IZL9 346 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 PIAS4Q8N2W9 510 aaPredicted RBP14.13□□□□□ -0.15
C9orf3-204ENST00000424143 OR2L13Q8N349 312 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 SPICQ8N5J4 248 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 ZNF366Q8N895 744 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 RPLP0P6Q8NHW5 317 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 TMEM239Q8WW34 195 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 PTP4A1Q93096 173 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 FERD3LQ96RJ6 166 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 INSM2Q96T92 566 aaPredicted RBP14.13□□□□□ -0.15
C9orf3-204ENST00000424143 UTP23Q9BRU9 249 aaKnown RBP14.13□□□□□ -0.15
C9orf3-204ENST00000424143 ADGRL4Q9HBW9 690 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 POLE3Q9NRF9 147 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 KIF25Q9UIL4 384 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 ST6GALNAC2Q9UJ37 374 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 TBX21Q9UL17 535 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 SLC7A7Q9UM01 511 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 WDR45Q9Y484 360 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 NOTCH4Q99466 2003 aa14.13□□□□□ -0.15
C9orf3-204ENST00000424143 KHNYNO15037 678 aaKnown RBP14.12□□□□□ -0.15
C9orf3-204ENST00000424143 PPM1DO15297 605 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 PIP5K1CO60331 668 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 AK1P00568 194 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 UCHL1P09936 223 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 EPXP11678 715 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 DNASE1P24855 282 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 MNDAP41218 407 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 METAP1P53582 386 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 MRPS10P82664 201 aaKnown RBP14.12□□□□□ -0.15
C9orf3-204ENST00000424143 ZNF85Q03923 595 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 NOGQ13253 232 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 MFSD13AQ14CX5 517 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 ZNF613Q6PF04 617 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 FBXL6Q8N531 539 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 ZNF527Q8NB42 609 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 OR9A2Q8NGT5 310 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 NT5CQ8TCD5 201 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 C15orf40Q8WUR7 153 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 KLK6Q92876 244 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 GAL3ST3Q96A11 431 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 ZNF350Q9GZX5 532 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 SERTAD3Q9UJW9 196 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 TRABD2BA6NFA1 517 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 RIIAD1A6NNX1 92 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 C4orf51C9J302 202 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 DVL2O14641 736 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 GPRIN2O60269 458 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms