RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 PRIM2P49643 509 aa14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 CD226Q15762 336 aa14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 ZNF678Q5SXM1 525 aa14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 B3GLCTQ6Y288 498 aa14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 GPRIN3Q6ZVF9 776 aa14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 MEX3DQ86XN8 651 aaKnown RBP14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 RFLNBQ8N5W9 214 aa14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 ZNF433Q8N7K0 673 aaPredicted RBP14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 OR2W6PQ8NHA6 318 aa14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 CEP70Q8NHQ1 597 aa14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 FBXO27Q8NI29 283 aa14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 ZFP90Q8TF47 636 aa14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 ZNF75CPQ92670 426 aaPredicted RBP14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 NAPGQ99747 312 aaPredicted RBP14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 PRR14Q9BWN1 585 aa14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 ACSS3Q9H6R3 686 aa14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 MYNNQ9NPC7 610 aa14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 EQTNQ9NQ60 294 aa14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 NTMQ9P121 344 aa14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 POU2F3Q9UKI9 436 aa14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 UTP11Q9Y3A2 253 aaKnown RBP14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 ACTL7BQ9Y614 415 aa14.74□□□□□ -0.05
CHCHD3-202ENST00000423635 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.73□□□□□ -0.05
CHCHD3-202ENST00000423635 ZNF724A8MTY0 619 aa14.73□□□□□ -0.05
CHCHD3-202ENST00000423635 NDUFS8O00217 210 aa14.73□□□□□ -0.05
CHCHD3-202ENST00000423635 SCDO00767 359 aa14.73□□□□□ -0.05
CHCHD3-202ENST00000423635 SPRY1O43609 319 aaPredicted RBP14.73□□□□□ -0.05
CHCHD3-202ENST00000423635 GNG11P61952 73 aa14.73□□□□□ -0.05
CHCHD3-202ENST00000423635 ZNF551Q7Z340 670 aaPredicted RBP14.73□□□□□ -0.05
CHCHD3-202ENST00000423635 MTERF4Q7Z6M4 381 aaKnown RBP14.73□□□□□ -0.05
CHCHD3-202ENST00000423635 DEPDC4Q8N2C3 294 aa14.73□□□□□ -0.05
CHCHD3-202ENST00000423635 SPATA4Q8NEY3 305 aa14.73□□□□□ -0.05
CHCHD3-202ENST00000423635 FAM76AQ8TAV0 307 aa14.73□□□□□ -0.05
CHCHD3-202ENST00000423635 GIMAP5Q96F15 307 aa14.73□□□□□ -0.05
CHCHD3-202ENST00000423635 INPP5KQ9BT40 448 aa14.73□□□□□ -0.05
CHCHD3-202ENST00000423635 SLC25A15Q9Y619 301 aa14.73□□□□□ -0.05
CHCHD3-202ENST00000423635 GPC6Q9Y625 555 aaPredicted RBP14.73□□□□□ -0.05
CHCHD3-202ENST00000423635 IGHV3-15A0A0B4J1V0 119 aa14.72□□□□□ -0.05
CHCHD3-202ENST00000423635 TCF21O43680 179 aa14.72□□□□□ -0.05
CHCHD3-202ENST00000423635 CYTIPO60759 359 aa14.72□□□□□ -0.05
CHCHD3-202ENST00000423635 HSPA4LO95757 839 aa14.72□□□□□ -0.05
CHCHD3-202ENST00000423635 ENO1P06733 434 aaKnown RBP14.72□□□□□ -0.05
CHCHD3-202ENST00000423635 NR4A2P43354 598 aa14.72□□□□□ -0.05
CHCHD3-202ENST00000423635 CHRNB3Q05901 458 aa14.72□□□□□ -0.05
CHCHD3-202ENST00000423635 SPOCK1Q08629 439 aa14.72□□□□□ -0.05
CHCHD3-202ENST00000423635 RASGEF1BQ0VAM2 473 aa14.72□□□□□ -0.05
CHCHD3-202ENST00000423635 KLHL17Q6TDP4 642 aa14.72□□□□□ -0.05
CHCHD3-202ENST00000423635 SLC16A11Q8NCK7 471 aa14.72□□□□□ -0.05
CHCHD3-202ENST00000423635 NUP43Q8NFH3 380 aa14.72□□□□□ -0.05
CHCHD3-202ENST00000423635 FUT8Q9BYC5 575 aa14.72□□□□□ -0.05
CHCHD3-202ENST00000423635 EML4Q9HC35 981 aaKnown RBP14.72□□□□□ -0.05
CHCHD3-202ENST00000423635 ICAM5Q9UMF0 924 aa14.72□□□□□ -0.05
CHCHD3-202ENST00000423635 TIMM22Q9Y584 194 aa14.72□□□□□ -0.05
CHCHD3-202ENST00000423635 PMF1-BGLAPU3KQ54 211 aa14.72□□□□□ -0.05
CHCHD3-202ENST00000423635 CCDC151A5D8V7 595 aa14.71□□□□□ -0.05
CHCHD3-202ENST00000423635 C9JVG2 144 aa14.71□□□□□ -0.05
CHCHD3-202ENST00000423635 ACP2P11117 423 aa14.71□□□□□ -0.05
CHCHD3-202ENST00000423635 IMPDH1P20839 514 aa14.71□□□□□ -0.05
CHCHD3-202ENST00000423635 CFPP27918 469 aa14.71□□□□□ -0.05
CHCHD3-202ENST00000423635 APOBEC3AP31941 199 aaPredicted RBP14.71□□□□□ -0.05
CHCHD3-202ENST00000423635 PHBP35232 272 aa14.71□□□□□ -0.05
CHCHD3-202ENST00000423635 SERPINB4P48594 390 aa14.71□□□□□ -0.05
CHCHD3-202ENST00000423635 PDLIM4P50479 330 aa14.71□□□□□ -0.05
CHCHD3-202ENST00000423635 P2RX1P51575 399 aa14.71□□□□□ -0.05
CHCHD3-202ENST00000423635 ZNF117Q03924 483 aa14.71□□□□□ -0.05
CHCHD3-202ENST00000423635 GGTLC2Q14390 218 aa14.71□□□□□ -0.05
CHCHD3-202ENST00000423635 SPDYAQ5MJ70 313 aa14.71□□□□□ -0.05
CHCHD3-202ENST00000423635 EXOSC6Q5RKV6 272 aaKnown RBP14.71□□□□□ -0.05
CHCHD3-202ENST00000423635 ZCCHC12Q6PEW1 402 aa14.71□□□□□ -0.05
CHCHD3-202ENST00000423635 CBLN3Q6UW01 205 aa14.71□□□□□ -0.05
CHCHD3-202ENST00000423635 IKBIPQ70UQ0 350 aa14.71□□□□□ -0.05
CHCHD3-202ENST00000423635 CDC26Q8NHZ8 85 aa14.71□□□□□ -0.05
CHCHD3-202ENST00000423635 ZNF775Q96BV0 537 aaPredicted RBP14.71□□□□□ -0.05
CHCHD3-202ENST00000423635 ZNF300Q96RE9 604 aaPredicted RBP14.71□□□□□ -0.05
CHCHD3-202ENST00000423635 RAB17Q9H0T7 212 aa14.71□□□□□ -0.05
CHCHD3-202ENST00000423635 STK38LQ9Y2H1 464 aa14.71□□□□□ -0.05
CHCHD3-202ENST00000423635 SMAD9O15198 467 aaKnown RBP14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 LY6HO94772 140 aa14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 TGFAP01135 160 aa14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 APEHP13798 732 aaKnown RBP14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 PRKCAP17252 672 aa14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 SERPINB9P50453 376 aa14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 ZNF83P51522 516 aa14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 PRKAG1P54619 331 aa14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 PKNOX1P55347 436 aa14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 SUMO3P55854 103 aaPredicted RBP14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 HSPB3Q12988 150 aa14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 DUSP5Q16690 384 aa14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 SLC25A53Q5H9E4 307 aa14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 FBXW9Q5XUX1 488 aa14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 C12orf54Q6X4T0 127 aa14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 GALNT5Q7Z7M9 940 aa14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 ZNF100Q8IYN0 542 aa14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 ATP6V1C2Q8NEY4 427 aa14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 OR52N5Q8NH56 324 aa14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 GPR119Q8TDV5 335 aa14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 C1orf159Q96HA4 380 aa14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 MRGPRX4Q96LA9 322 aa14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 MUS81Q96NY9 551 aa14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 TMEM237Q96Q45 408 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms