RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 PLPPR5Q32ZL2 321 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.87□□□□□ -0.83
USP49-204ENST00000423567 OR2A2Q6IF42 318 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 TYW3Q6IPR3 259 aaKnown RBP9.87□□□□□ -0.83
USP49-204ENST00000423567 PPP4R4Q6NUP7 873 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 GDF7Q7Z4P5 450 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 ADGRE4PQ86SQ3 457 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 MCEMP1Q8IX19 187 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 C9orf106Q8NAJ2 232 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 NAXEQ8NCW5 288 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 OR5W2Q8NH69 310 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 ZFP90Q8TF47 636 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 STON2Q8WXE9 905 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 INTS12Q96CB8 462 aaKnown RBP9.87□□□□□ -0.83
USP49-204ENST00000423567 THOC1Q96FV9 657 aaKnown RBP9.87□□□□□ -0.83
USP49-204ENST00000423567 RNF145Q96MT1 663 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 SFXN3Q9BWM7 321 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 PINK1Q9BXM7 581 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 PRRG4Q9BZD6 226 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 LAT2Q9GZY6 243 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 ENKD1Q9H0I2 346 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 TPT1P8Q9HAU6 139 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 NPHS2Q9NP85 383 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 MED4Q9NPJ6 270 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 ZNF446Q9NWS9 450 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 PAQR5Q9NXK6 330 aaPredicted RBP9.87□□□□□ -0.83
USP49-204ENST00000423567 CALML5Q9NZT1 146 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 CCDC167Q9P0B6 97 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 CLCF1Q9UBD9 225 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 DCTN4Q9UJW0 460 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 ICAM5Q9UMF0 924 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 SLC35A3Q9Y2D2 325 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 ZNF175Q9Y473 711 aa9.87□□□□□ -0.83
USP49-204ENST00000423567 GPC6Q9Y625 555 aaPredicted RBP9.87□□□□□ -0.83
USP49-204ENST00000423567 UTP20O75691 2785 aaKnown RBP9.87□□□□□ -0.83
USP49-204ENST00000423567 CYSRT1A8MQ03 144 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 EEF1E1-BLOC1S5C9J1V9 151 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 EEF1E1O43324 174 aaKnown RBP9.86□□□□□ -0.83
USP49-204ENST00000423567 LINGO3P0C6S8 592 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 TROVE2P10155 538 aaKnown RBP eCLIP9.86□□□□□ -0.83
USP49-204ENST00000423567 ADH6P28332 368 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 UQCRC1P31930 480 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 EIF1AXP47813 144 aaKnown RBP9.86□□□□□ -0.83
USP49-204ENST00000423567 ZNF136P52737 540 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 SUCLG1P53597 346 aaKnown RBP9.86□□□□□ -0.83
USP49-204ENST00000423567 CLDN15P56746 228 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 CLDN20P56880 219 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 CHRNEQ04844 493 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 TFF3Q07654 80 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 FOXF1Q12946 379 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 FGFBP1Q14512 234 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 TMEM44Q2T9K0 475 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 AGKQ53H12 422 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 CBLN3Q6UW01 205 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 FRRS1Q6ZNA5 592 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 LRRC74BQ6ZQY2 392 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 ESPNLQ6ZVH7 1005 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 OLIG3Q7RTU3 272 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 LIX1LQ8IVB5 337 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 METTL25Q8N6Q8 603 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 FBXO27Q8NI29 283 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 GPR119Q8TDV5 335 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 TMEM234Q8WY98 164 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 PMM1Q92871 262 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 SPDL1Q96EA4 605 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 MRGPRX4Q96LA9 322 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 PCNX1Q96RV3 2341 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 SAP130Q9H0E3 1048 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 TMEM185BQ9H7F4 350 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 MTHFD2LQ9H903 347 aaPredicted RBP9.86□□□□□ -0.83
USP49-204ENST00000423567 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.86□□□□□ -0.83
USP49-204ENST00000423567 P2RX2Q9UBL9 471 aa9.86□□□□□ -0.83
USP49-204ENST00000423567 FOXD3Q9UJU5 478 aaPredicted RBP9.86□□□□□ -0.83
USP49-204ENST00000423567 MCTS1Q9ULC4 181 aaKnown RBP9.86□□□□□ -0.83
USP49-204ENST00000423567 A0A096LPI6 279 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 OIP5O43482 229 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 SYNGR4O95473 234 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 CRHP06850 196 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 UBTFL6P0CB48 400 aaPredicted RBP9.85□□□□□ -0.83
USP49-204ENST00000423567 UQCRBP14927 111 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 IL7RP16871 459 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 PGCP20142 388 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 PPIBP23284 216 aaKnown RBP9.85□□□□□ -0.83
USP49-204ENST00000423567 SSTR2P30874 369 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 CPA2P48052 419 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 AGFG1P52594 562 aaKnown RBP9.85□□□□□ -0.83
USP49-204ENST00000423567 CRISP3P54108 245 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 DSTNP60981 165 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 KCNJ10P78508 379 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 FUT5Q11128 374 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 SKP2Q13309 424 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 PON3Q15166 354 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 QPRTQ15274 297 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 SYPL1Q16563 259 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 NDUFAF6Q330K2 333 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 COX20Q5RI15 118 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 SLC2A7Q6PXP3 512 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 KIF18BQ86Y91 864 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 CMIPQ8IY22 773 aa9.85□□□□□ -0.83
USP49-204ENST00000423567 PEX5LQ8IYB4 626 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms