RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 DCLRE1BQ9H816 532 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 CRIM1Q9NZV1 1036 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 ASB4Q9Y574 426 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 IGHV1OR21-1A0A087WYE8 117 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 TRAV20A0A0B4J274 112 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 IGKV6D-41A0A0C4DH26 115 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 LOC100653049A0A140TA62 436 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 C13orf42A0A1B0GVH6 325 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 OR5H14A6NHG9 310 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 OR5H1A6NKK0 313 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 COPEO14579 308 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 ACOT8O14734 319 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 GABRDO14764 452 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 PDPK1O15530 556 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 GATBO75879 557 aaKnown RBP3.28□□□□□ -1.88
TOP2A-201ENST00000423485 KRT34O76011 436 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 ACSL3O95573 720 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 IFNA10P01566 189 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 S100A6P06703 90 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 TRAPPC2P0DI81 140 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 TRAPPC2BP0DI82 140 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 ARR3P36575 388 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 CD79BP40259 229 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 CSNK1A1P48729 337 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF81P51508 661 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 TAS2R41P59536 307 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 ZSWIM7Q19AV6 140 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 ATP6AP1LQ52LC2 224 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 LAMTOR1Q6IAA8 161 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 ADAMTSL4Q6UY14 1074 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 PTCHD4Q6ZW05 846 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 SLC26A9Q7LBE3 791 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 SLC16A13Q7RTY0 426 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 SLC15A4Q8N697 577 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 BBS1Q8NFJ9 593 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF606Q8WXB4 792 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 DTD2Q96FN9 168 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 MRGPRX3Q96LB0 322 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 UQCC2Q9BRT2 126 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 OR51B6Q9H340 312 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 LANCL2Q9NS86 450 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 CACNG4Q9UBN1 327 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 NKX1-2Q9UD57 310 aaPredicted RBP3.28□□□□□ -1.88
TOP2A-201ENST00000423485 IGHV5-10-1A0A0J9YXX1 117 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 PRAMEF25A6NGN4 478 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 B4DSR2 109 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 NDUFS8O00217 210 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 SUV39H1O43463 412 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 SNX3O60493 162 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 SEMA7AO75326 666 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 AK1P00568 194 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 SP1P08047 785 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 CYC1P08574 325 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 ZGLP1P0C6A0 271 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 ELK4P28324 431 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 ADH6P28332 368 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 CRABP2P29373 138 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 PCK1P35558 622 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 RPS18P62269 152 aaKnown RBP3.28□□□□□ -1.88
TOP2A-201ENST00000423485 MOGSQ13724 837 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 NR1I3Q14994 352 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 SULT1C3Q6IMI6 304 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 ACAD10Q6JQN1 1059 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 NHLRC1Q6VVB1 395 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 SMYD4Q8IYR2 804 aaPredicted RBP3.28□□□□□ -1.88
TOP2A-201ENST00000423485 LMNTD1Q8N9Z9 388 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 UXS1Q8NBZ7 420 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 FBXO36Q8NEA4 188 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 SLC30A5Q8TAD4 765 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF671Q8TAW3 534 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 LINC01560Q8TB33 94 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 AKAP1Q92667 903 aaKnown RBP eCLIP3.28□□□□□ -1.88
TOP2A-201ENST00000423485 TRIM63Q969Q1 353 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 GRAMD2BQ96HH9 432 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 PTDSS2Q9BVG9 487 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 TRIM2Q9C040 744 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 TMEM231Q9H6L2 316 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 THUMPD1Q9NXG2 353 aaKnown RBP3.28□□□□□ -1.88
TOP2A-201ENST00000423485 HCSTQ9UBK5 93 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 CARD8Q9Y2G2 431 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 MED31Q9Y3C7 131 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 A0A0A6YYJ9 748 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 MROH6A6NGR9 719 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 NCBP2LA6PVI3 153 aaKnown RBP3.27□□□□□ -1.89
TOP2A-201ENST00000423485 SLCO1B7G3V0H7 640 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 H3BSH0 61 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 HS3ST1O14792 307 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 RNF13O43567 381 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 TUSC2O75896 110 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 PRSS23O95084 383 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 TNFAIP8O95379 198 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 CNOT4O95628 575 aaKnown RBP3.27□□□□□ -1.89
TOP2A-201ENST00000423485 TXNDC12O95881 172 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 AGAP20933 346 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 IVDP26440 423 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 HLA-FP30511 346 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 TNFSF8P32971 234 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 VDAC2P45880 294 aaPredicted RBP3.27□□□□□ -1.89
TOP2A-201ENST00000423485 GSSP48637 474 aa3.27□□□□□ -1.89
TOP2A-201ENST00000423485 AP1S2P56377 157 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms