RNA–Protein interactions for RNA: ENST00000421922.6

CCDC28B-202, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 1 (best) BASIC

Gene CCDC28B, Length 1,415 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-202ENST00000421922 FNDC7Q5VTL7 733 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 H3F3CQ6NXT2 135 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 LYPD8Q6UX82 237 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 LINC00471Q8N535 108 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 TOR1AIP2Q8NFQ8 470 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 OR10G2Q8NGC3 310 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 ZNF563Q8TA94 476 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 GRHL3Q8TE85 626 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 DNAJC9Q8WXX5 260 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 DHRS1Q96LJ7 313 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 PRR14Q9BWN1 585 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 OSBPL11Q9BXB4 747 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 GABARAPL1Q9H0R8 117 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 ANKRD19PQ9H560 264 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 ZNF556Q9HAH1 456 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 KRCC1Q9NPI7 259 aaPredicted RBP15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 ACER3Q9NUN7 267 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 PPP4R1LQ9P1A2 415 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 MSRB2Q9Y3D2 182 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 PCSK5Q92824 1860 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 DOCK10Q96BY6 2186 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 A0A1W2PRQ8 180 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 FFAR1O14842 300 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 KLK10O43240 276 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 BCAS1O75363 584 aaPredicted RBP15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 CAPNS1P04632 268 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 THRBP10828 461 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 CDH2P19022 906 aaPredicted RBP15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 ELAVL4P26378 380 aaKnown RBP15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 RAD23AP54725 363 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 IL1RL1Q01638 556 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 OC90Q02509 493 aaPredicted RBP15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 C17orf67Q0P5P2 114 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 EPS8Q12929 822 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 SKP2Q13309 424 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 CBFBQ13951 182 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 DGCR6Q14129 220 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 LAPTM4AQ15012 233 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 MICAQ29983 383 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 ZNF791Q3KP31 576 aaPredicted RBP15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 B3GNTL1Q67FW5 361 aaPredicted RBP15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 ZNF613Q6PF04 617 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 APOOLQ6UXV4 268 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 TMEM179BQ7Z7N9 219 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 GPALPP1Q8IXQ4 340 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 HS3ST5Q8IZT8 346 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 ARMC10Q8N2F6 343 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 FAM71CQ8NEG0 241 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 B4GALNT2Q8NHY0 566 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 SECISBP2Q96T21 854 aaKnown RBP15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 SLC29A1Q99808 456 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 Q9H521 79 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 SLC7A7Q9UM01 511 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 NTNG1Q9Y2I2 539 aa15.68■□□□□ 0.1
CCDC28B-202ENST00000421922 H0YJX3 145 aa15.67■□□□□ 0.1
CCDC28B-202ENST00000421922 NKX2-8O15522 239 aa15.67■□□□□ 0.1
CCDC28B-202ENST00000421922 GMFGO60234 142 aa15.67■□□□□ 0.1
CCDC28B-202ENST00000421922 OR10H3O60404 316 aa15.67■□□□□ 0.1
CCDC28B-202ENST00000421922 MAN1A2O60476 641 aa15.67■□□□□ 0.1
CCDC28B-202ENST00000421922 PGCP20142 388 aa15.67■□□□□ 0.1
CCDC28B-202ENST00000421922 IGFBP5P24593 272 aa15.67■□□□□ 0.1
CCDC28B-202ENST00000421922 IFNGR2P38484 337 aa15.67■□□□□ 0.1
CCDC28B-202ENST00000421922 ZNF117Q03924 483 aa15.67■□□□□ 0.1
CCDC28B-202ENST00000421922 CDC20Q12834 499 aa15.67■□□□□ 0.1
CCDC28B-202ENST00000421922 SRSF6Q13247 344 aaKnown RBP15.67■□□□□ 0.1
CCDC28B-202ENST00000421922 ZNF730Q6ZMV8 503 aa15.67■□□□□ 0.1
CCDC28B-202ENST00000421922 RTL4Q6ZR62 310 aa15.67■□□□□ 0.1
CCDC28B-202ENST00000421922 GDF7Q7Z4P5 450 aa15.67■□□□□ 0.1
CCDC28B-202ENST00000421922 CYP4Z2PQ8N1L4 340 aa15.67■□□□□ 0.1
CCDC28B-202ENST00000421922 GALNT16Q8N428 558 aa15.67■□□□□ 0.1
CCDC28B-202ENST00000421922 OR4C15Q8NGM1 316 aa15.67■□□□□ 0.1
CCDC28B-202ENST00000421922 SGCZQ96LD1 299 aa15.67■□□□□ 0.1
CCDC28B-202ENST00000421922 DPH1Q9BZG8 443 aa15.67■□□□□ 0.1
CCDC28B-202ENST00000421922 MAGED1Q9Y5V3 778 aaPredicted RBP15.67■□□□□ 0.1
CCDC28B-202ENST00000421922 WIF1Q9Y5W5 379 aa15.67■□□□□ 0.1
CCDC28B-202ENST00000421922 FRYQ5TBA9 3013 aa15.66■□□□□ 0.1
CCDC28B-202ENST00000421922 TRBV4-1A0A0J9YWV2 114 aa15.66■□□□□ 0.1
CCDC28B-202ENST00000421922 FAM47E-STBD1D6RA91 191 aa15.66■□□□□ 0.1
CCDC28B-202ENST00000421922 SEMA7AO75326 666 aa15.66■□□□□ 0.1
CCDC28B-202ENST00000421922 P04436 131 aa15.66■□□□□ 0.1
CCDC28B-202ENST00000421922 ANXA8P13928 327 aa15.66■□□□□ 0.1
CCDC28B-202ENST00000421922 ZNF26P17031 533 aaPredicted RBP15.66■□□□□ 0.1
CCDC28B-202ENST00000421922 PRKACGP22612 351 aa15.66■□□□□ 0.1
CCDC28B-202ENST00000421922 HTR2AP28223 471 aa15.66■□□□□ 0.1
CCDC28B-202ENST00000421922 CYB561P49447 251 aa15.66■□□□□ 0.1
CCDC28B-202ENST00000421922 P2RX1P51575 399 aa15.66■□□□□ 0.1
CCDC28B-202ENST00000421922 HMGA2P52926 109 aa15.66■□□□□ 0.1
CCDC28B-202ENST00000421922 UGT2B15P54855 530 aa15.66■□□□□ 0.1
CCDC28B-202ENST00000421922 SUMO3P55854 103 aaPredicted RBP15.66■□□□□ 0.1
CCDC28B-202ENST00000421922 PLAURQ03405 335 aa15.66■□□□□ 0.1
CCDC28B-202ENST00000421922 SNTA1Q13424 505 aa15.66■□□□□ 0.1
CCDC28B-202ENST00000421922 RFX4Q33E94 735 aa15.66■□□□□ 0.1
CCDC28B-202ENST00000421922 CRTC2Q53ET0 693 aaPredicted RBP15.66■□□□□ 0.1
CCDC28B-202ENST00000421922 ALG10BQ5I7T1 473 aa15.66■□□□□ 0.1
CCDC28B-202ENST00000421922 SLC22A10Q63ZE4 541 aa15.66■□□□□ 0.1
CCDC28B-202ENST00000421922 WBP2NLQ6ICG8 309 aa15.66■□□□□ 0.1
CCDC28B-202ENST00000421922 SLC30A6Q6NXT4 461 aa15.66■□□□□ 0.1
CCDC28B-202ENST00000421922 TBPL2Q6SJ96 375 aa15.66■□□□□ 0.1
CCDC28B-202ENST00000421922 BEST3Q8N1M1 668 aa15.66■□□□□ 0.1
CCDC28B-202ENST00000421922 DUSP19Q8WTR2 217 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms