RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 HSPA12BQ96MM6 686 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 SLC46A1Q96NT5 459 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 ASPNQ9BXN1 380 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 DUSP15Q9H1R2 295 aaPredicted RBP13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 OR10A5Q9H207 317 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 STARD5Q9NSY2 213 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 HAO2Q9NYQ3 351 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 RPS6KB2Q9UBS0 482 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 CBLCQ9ULV8 474 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 SIGLEC7Q9Y286 467 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 CENPVL1A0A0U1RR11 272 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 GXYLT2A0PJZ3 443 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 SLC35F4A4IF30 521 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 RIIAD1A6NNX1 92 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 CDC42EP2O14613 210 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 HCRTR1O43613 425 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 GPX5O75715 221 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 HLA-DPB1P04440 258 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 ADRA2AP08913 450 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 SAGP10523 405 aaPredicted RBP13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 GLB1P16278 677 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 ETV5P41161 510 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 ETV1P50549 477 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 TAS2R43P59537 309 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 LSM11P83369 360 aaKnown RBP eCLIP13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 ALG10BQ5I7T1 473 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 PRPF38BQ5VTL8 546 aaKnown RBP13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 NIPAL3Q6P499 406 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 PRSS42Q7Z5A4 293 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 CEP19Q96LK0 163 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 SAMD8Q96LT4 415 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 EXOSC4Q9NPD3 245 aaKnown RBP13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 MKKSQ9NPJ1 570 aaPredicted RBP13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 ASB6Q9NWX5 421 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 TNFRSF10DQ9UBN6 386 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 TRAPPC4Q9Y296 219 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 OR10H1Q9Y4A9 318 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 CLDN16Q9Y5I7 305 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 SPIN1Q9Y657 262 aaPredicted RBP13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 SCN2AQ99250 2005 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 CCDC163A0A0D9SF12 145 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 A0A1B0GWA3 101 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 LIMS3P0CW19 117 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 LIMS4P0CW20 117 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 CT45A8P0DMV1 189 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 CT45A9P0DMV2 189 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 CKMT1AP12532 417 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 TBXA2RP21731 343 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 CD1CP29017 333 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 SOX3P41225 446 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 ARL4DP49703 201 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 HOXC5Q00444 222 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 FOXK2Q01167 660 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 MLLT1Q03111 559 aaPredicted RBP13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 CDC20Q12834 499 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 ATP1A4Q13733 1029 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 ZNF267Q14586 743 aaPredicted RBP13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 CT45A2Q5DJT8 189 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 PTCRAQ6ISU1 281 aaPredicted RBP13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 LINC00114Q6XXX2 140 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 ZBTB46Q86UZ6 589 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 ACBD7Q8N6N7 88 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 ZNF615Q8N8J6 731 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 ZNF485Q8NCK3 441 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 FAM71CQ8NEG0 241 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 OR4C6Q8NH72 309 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 C16orf52Q8NHV5 167 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 ABTB1Q969K4 478 aaPredicted RBP13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 SLC25A46Q96AG3 418 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 TGM7Q96PF1 710 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 PRR14Q9BWN1 585 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 DPH1Q9BZG8 443 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 NDEL1Q9GZM8 345 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 KCNN2Q9H2S1 579 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 C12orf10Q9HB07 376 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 CUTCQ9NTM9 273 aa13.43□□□□□ -0.26
HLA-DPA1-242ENST00000419277 IGHV5-51A0A0C4DH38 117 aa13.42□□□□□ -0.26
HLA-DPA1-242ENST00000419277 TRDV1A0A1B0GX56 115 aa13.42□□□□□ -0.26
HLA-DPA1-242ENST00000419277 SERINC4A6NH21 518 aa13.42□□□□□ -0.26
HLA-DPA1-242ENST00000419277 PIP5K1CO60331 668 aa13.42□□□□□ -0.26
HLA-DPA1-242ENST00000419277 OR2B3O76000 313 aa13.42□□□□□ -0.26
HLA-DPA1-242ENST00000419277 GKN3PP0CG01 181 aa13.42□□□□□ -0.26
HLA-DPA1-242ENST00000419277 PNMTP11086 282 aa13.42□□□□□ -0.26
HLA-DPA1-242ENST00000419277 PEPDP12955 493 aa13.42□□□□□ -0.26
HLA-DPA1-242ENST00000419277 PRG2P13727 222 aa13.42□□□□□ -0.26
HLA-DPA1-242ENST00000419277 ATP6V1E1P36543 226 aa13.42□□□□□ -0.26
HLA-DPA1-242ENST00000419277 ACAA2P42765 397 aaKnown RBP13.42□□□□□ -0.26
HLA-DPA1-242ENST00000419277 PPICP45877 212 aa13.42□□□□□ -0.26
HLA-DPA1-242ENST00000419277 LIPKQ5VXJ0 399 aa13.42□□□□□ -0.26
HLA-DPA1-242ENST00000419277 WDR74Q6RFH5 385 aaPredicted RBP13.42□□□□□ -0.26
HLA-DPA1-242ENST00000419277 CHRDL2Q6WN34 429 aa13.42□□□□□ -0.26
HLA-DPA1-242ENST00000419277 HSDL2Q6YN16 418 aa13.42□□□□□ -0.26
HLA-DPA1-242ENST00000419277 MAMSTRQ6ZN01 415 aa13.42□□□□□ -0.26
HLA-DPA1-242ENST00000419277 MEPCEQ7L2J0 689 aaKnown RBP13.42□□□□□ -0.26
HLA-DPA1-242ENST00000419277 CCDC190Q86UF4 302 aa13.42□□□□□ -0.26
HLA-DPA1-242ENST00000419277 EGFL6Q8IUX8 553 aa13.42□□□□□ -0.26
HLA-DPA1-242ENST00000419277 GPR135Q8IZ08 494 aa13.42□□□□□ -0.26
HLA-DPA1-242ENST00000419277 D2HGDHQ8N465 521 aa13.42□□□□□ -0.26
HLA-DPA1-242ENST00000419277 SETD6Q8TBK2 473 aa13.42□□□□□ -0.26
HLA-DPA1-242ENST00000419277 ITPKCQ96DU7 683 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms