RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 UBL4AP11441 157 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 IDO1P14902 403 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 ELK4P28324 431 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 CHI3L1P36222 383 aaPredicted RBP14.78□□□□□ -0.04
LINC00404-201ENST00000418660 KHKP50053 298 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 SIRPAP78324 504 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 FOXF1Q12946 379 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 GUSBP1Q15486 140 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 NDUFAF6Q330K2 333 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 PDSS1Q5T2R2 415 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 AP1ARQ63HQ0 302 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 TNFAIP8L2Q6P589 184 aaPredicted RBP14.78□□□□□ -0.04
LINC00404-201ENST00000418660 FAM214BQ7L5A3 538 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 LILRA2Q8N149 483 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 TRIML2Q8N7C3 387 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 TOR1AIP2Q8NFQ8 470 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 OR5W2Q8NH69 310 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 FBXO27Q8NI29 283 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 OIT3Q8WWZ8 545 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 RAB8BQ92930 207 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 ARSGQ96EG1 525 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 KLHL15Q96M94 604 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 DACH2Q96NX9 599 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 OR52E6Q96RD3 313 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 PANX1Q96RD7 426 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 SLC35A5Q9BS91 424 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 CLEC4MQ9H2X3 399 aaPredicted RBP14.78□□□□□ -0.04
LINC00404-201ENST00000418660 TMEM185BQ9H7F4 350 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 POLE3Q9NRF9 147 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 KCNE5Q9UJ90 142 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 MCTS1Q9ULC4 181 aaKnown RBP14.78□□□□□ -0.04
LINC00404-201ENST00000418660 CSMD2Q7Z408 3487 aa14.78□□□□□ -0.04
LINC00404-201ENST00000418660 MED12LQ86YW9 2145 aa14.77□□□□□ -0.04
LINC00404-201ENST00000418660 NUP214P35658 2090 aaPredicted RBP14.77□□□□□ -0.04
LINC00404-201ENST00000418660 POLQO75417 2590 aa14.77□□□□□ -0.04
LINC00404-201ENST00000418660 CCDC154A6NI56 674 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 C9JVG2 144 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 ZNF195O14628 629 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 TNFSF11O14788 317 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 GOSR1O95249 250 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 SYNGR4O95473 234 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 CGAP01215 116 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 CD8BP10966 210 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 PRKCAP17252 672 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 IL11P20809 199 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 CPOXP36551 454 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 SLC6A8P48029 635 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 TOMM34Q15785 309 aaPredicted RBP14.77□□□□□ -0.05
LINC00404-201ENST00000418660 SLC9B1Q4ZJI4 515 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 PDCD4Q53EL6 469 aaKnown RBP14.77□□□□□ -0.05
LINC00404-201ENST00000418660 SLC25A53Q5H9E4 307 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 HBMQ6B0K9 141 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 PPP4R4Q6NUP7 873 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 OLIG3Q7RTU3 272 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 MAVSQ7Z434 540 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 RFWD2Q8NHY2 731 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 ROPN1LQ96C74 230 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 MRGPRX4Q96LA9 322 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 LAT2Q9GZY6 243 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 SAP130Q9H0E3 1048 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 ELOVL5Q9NYP7 299 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 NDRG3Q9UGV2 375 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 WDR45Q9Y484 360 aa14.77□□□□□ -0.05
LINC00404-201ENST00000418660 SH3D21A4FU49 640 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 GJE1A6NN92 205 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 EFNA2O43921 213 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 KIAA0513O60268 411 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 DNAJA2O60884 412 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 SLC22A3O75751 556 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 NTN1O95631 604 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 IL6P05231 212 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 DNAJA1P31689 397 aaKnown RBP14.76□□□□□ -0.05
LINC00404-201ENST00000418660 CD79BP40259 229 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 CARD18P57730 90 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 TXNL4AP83876 142 aaKnown RBP14.76□□□□□ -0.05
LINC00404-201ENST00000418660 FAM27E3Q08E93 113 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 CBFBQ13951 182 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 TESK1Q15569 626 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 GSTA3Q16772 222 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 TYW3Q6IPR3 259 aaKnown RBP14.76□□□□□ -0.05
LINC00404-201ENST00000418660 ZNF474Q6S9Z5 364 aaPredicted RBP14.76□□□□□ -0.05
LINC00404-201ENST00000418660 EIF3MQ7L2H7 374 aaKnown RBP14.76□□□□□ -0.05
LINC00404-201ENST00000418660 CDC20BQ86Y33 519 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 TMCO5AQ8N6Q1 288 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 NRGNQ92686 78 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 OSTF1Q92882 214 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 GMPPAQ96IJ6 420 aaPredicted RBP14.76□□□□□ -0.05
LINC00404-201ENST00000418660 ATP6V1G3Q96LB4 118 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 OR52B2Q96RD2 323 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 SLC39A3Q9BRY0 314 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 INPP5KQ9BT40 448 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 OPN3Q9H1Y3 402 aaPredicted RBP14.76□□□□□ -0.05
LINC00404-201ENST00000418660 GLRX2Q9NS18 164 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 PROCRQ9UNN8 238 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 TACC2O95359 2948 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 OTOGQ6ZRI0 2925 aa14.76□□□□□ -0.05
LINC00404-201ENST00000418660 ANKHD1Q8IWZ3 2542 aaKnown RBP14.75□□□□□ -0.05
LINC00404-201ENST00000418660 CENPVL1A0A0U1RR11 272 aa14.75□□□□□ -0.05
LINC00404-201ENST00000418660 ETV2O00321 342 aaPredicted RBP14.75□□□□□ -0.05
LINC00404-201ENST00000418660 HMGN4O00479 90 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms