RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 ROPN1LQ96C74 230 aa9.18□□□□□ -0.94
HDLBP-206ENST00000417540 ZG16BQ96DA0 208 aa9.18□□□□□ -0.94
HDLBP-206ENST00000417540 PANX1Q96RD7 426 aa9.18□□□□□ -0.94
HDLBP-206ENST00000417540 PRPF18Q99633 342 aaKnown RBP9.18□□□□□ -0.94
HDLBP-206ENST00000417540 SPOCK3Q9BQ16 436 aa9.18□□□□□ -0.94
HDLBP-206ENST00000417540 PIGQQ9BRB3 760 aa9.18□□□□□ -0.94
HDLBP-206ENST00000417540 SLC38A1Q9H2H9 487 aa9.18□□□□□ -0.94
HDLBP-206ENST00000417540 IKZF5Q9H5V7 419 aa9.18□□□□□ -0.94
HDLBP-206ENST00000417540 TCF7L2Q9NQB0 619 aa9.18□□□□□ -0.94
HDLBP-206ENST00000417540 SDR39U1Q9NRG7 319 aaPredicted RBP9.18□□□□□ -0.94
HDLBP-206ENST00000417540 SLC25A37Q9NYZ2 338 aa9.18□□□□□ -0.94
HDLBP-206ENST00000417540 MRTO4Q9UKD2 239 aaKnown RBP9.18□□□□□ -0.94
HDLBP-206ENST00000417540 PRSS51A0A1B0GVH4 220 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 SERINC4A6NH21 518 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 HSPB2A8KAH6 182 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 HMGB1P1B2RPK0 211 aaPredicted RBP9.17□□□□□ -0.94
HDLBP-206ENST00000417540 DVL2O14641 736 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 UBDO15205 165 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 POLR3GO15318 223 aaPredicted RBP9.17□□□□□ -0.94
HDLBP-206ENST00000417540 SIAH2O43255 324 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 SNUPNO95149 360 aaKnown RBP9.17□□□□□ -0.94
HDLBP-206ENST00000417540 NTN1O95631 604 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 NUDT14O95848 222 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 IL2RAP01589 272 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 BCHEP06276 602 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 KRT16P08779 473 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 HOXD4P09016 255 aaPredicted RBP9.17□□□□□ -0.94
HDLBP-206ENST00000417540 NID1P14543 1247 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 IDO1P14902 403 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 HPGDP15428 266 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 PRKCAP17252 672 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 RPS4Y1P22090 263 aaKnown RBP9.17□□□□□ -0.94
HDLBP-206ENST00000417540 CTSSP25774 331 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 GCKP35557 465 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 ZNF41P51814 821 aaPredicted RBP9.17□□□□□ -0.94
HDLBP-206ENST00000417540 ATP12AP54707 1039 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 C17orf67Q0P5P2 114 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 FGFBP1Q14512 234 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 HSPB2Q16082 182 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 DPY19L1Q2PZI1 675 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 ARHGAP11BQ3KRB8 267 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 GPAT3Q53EU6 434 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 PAGE3Q5JUK9 113 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 ANXA8L1Q5VT79 327 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 ZNF836Q6ZNA1 936 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 HDXQ7Z353 690 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 ZNF550Q7Z398 422 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 ZNF619Q8N2I2 560 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 MEIOBQ8N635 442 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 ATP6V1C2Q8NEY4 427 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 LINC01560Q8TB33 94 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 ABHD3Q8WU67 409 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 CKAP2Q8WWK9 683 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 XAGE5Q8WWM1 108 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 MAL2Q969L2 176 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 RSPO3Q9BXY4 272 aaPredicted RBP9.17□□□□□ -0.94
HDLBP-206ENST00000417540 PAIP1Q9H074 479 aaKnown RBP9.17□□□□□ -0.94
HDLBP-206ENST00000417540 ZNF385DQ9H6B1 395 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 PTGES2Q9H7Z7 377 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 NPHS2Q9NP85 383 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 INTS9Q9NV88 658 aaKnown RBP9.17□□□□□ -0.94
HDLBP-206ENST00000417540 DNAJB12Q9NXW2 375 aaKnown RBP9.17□□□□□ -0.94
HDLBP-206ENST00000417540 ZIM2Q9NZV7 527 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 JKAMPQ9P055 326 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 SLAMF8Q9P0V8 285 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 WDR45Q9Y484 360 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 DTNAQ9Y4J8 743 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 C2CD3Q4AC94 2353 aa9.17□□□□□ -0.94
HDLBP-206ENST00000417540 C7orf72A4D263 438 aa9.16□□□□□ -0.94
HDLBP-206ENST00000417540 RFXANKO14593 260 aa9.16□□□□□ -0.94
HDLBP-206ENST00000417540 FRS3O43559 492 aa9.16□□□□□ -0.94
HDLBP-206ENST00000417540 SLC22A3O75751 556 aa9.16□□□□□ -0.94
HDLBP-206ENST00000417540 SMNDC1O75940 238 aaKnown RBP eCLIP9.16□□□□□ -0.94
HDLBP-206ENST00000417540 RCBTB2O95199 551 aa9.16□□□□□ -0.94
HDLBP-206ENST00000417540 PGM1P36871 562 aa9.16□□□□□ -0.94
HDLBP-206ENST00000417540 KIR2DL2P43627 348 aaPredicted RBP9.16□□□□□ -0.94
HDLBP-206ENST00000417540 CPA2P48052 419 aa9.16□□□□□ -0.94
HDLBP-206ENST00000417540 CLK3P49761 638 aaKnown RBP9.16□□□□□ -0.94
HDLBP-206ENST00000417540 P2RX1P51575 399 aa9.16□□□□□ -0.94
HDLBP-206ENST00000417540 POLR2JP52435 117 aaKnown RBP9.16□□□□□ -0.94
HDLBP-206ENST00000417540 HPCAP84074 193 aa9.16□□□□□ -0.94
HDLBP-206ENST00000417540 SELPLGQ14242 412 aa9.16□□□□□ -0.94
HDLBP-206ENST00000417540 ZNF141Q15928 474 aa9.16□□□□□ -0.94
HDLBP-206ENST00000417540 ZNF239Q16600 458 aaKnown RBP9.16□□□□□ -0.94
HDLBP-206ENST00000417540 C6orf10Q5SRN2 563 aa9.16□□□□□ -0.94
HDLBP-206ENST00000417540 ZNF621Q6ZSS3 439 aa9.16□□□□□ -0.94
HDLBP-206ENST00000417540 BTLAQ7Z6A9 289 aa9.16□□□□□ -0.94
HDLBP-206ENST00000417540 VRK2Q86Y07 508 aa9.16□□□□□ -0.94
HDLBP-206ENST00000417540 KIRREL3Q8IZU9 778 aa9.16□□□□□ -0.94
HDLBP-206ENST00000417540 MIER2Q8N344 545 aa9.16□□□□□ -0.94
HDLBP-206ENST00000417540 OR2V1Q8NHB1 315 aa9.16□□□□□ -0.94
HDLBP-206ENST00000417540 GPR119Q8TDV5 335 aa9.16□□□□□ -0.94
HDLBP-206ENST00000417540 ROBO4Q8WZ75 1007 aa9.16□□□□□ -0.94
HDLBP-206ENST00000417540 CNOT9Q92600 299 aaKnown RBP9.16□□□□□ -0.94
HDLBP-206ENST00000417540 RNASE6Q93091 150 aaKnown RBP9.16□□□□□ -0.94
HDLBP-206ENST00000417540 WNT2BQ93097 391 aa9.16□□□□□ -0.94
HDLBP-206ENST00000417540 KLHL15Q96M94 604 aa9.16□□□□□ -0.94
HDLBP-206ENST00000417540 UCN2Q96RP3 112 aa9.16□□□□□ -0.94
HDLBP-206ENST00000417540 ZBTB18Q99592 522 aa9.16□□□□□ -0.94
HDLBP-206ENST00000417540 THUMPD3Q9BV44 507 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms