RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 POC1BQ8TC44 478 aa22.68■■□□□ 1.22
VEGFA-208ENST00000417285 KLHL15Q96M94 604 aa22.68■■□□□ 1.22
VEGFA-208ENST00000417285 OR7D2Q96RA2 312 aa22.68■■□□□ 1.22
VEGFA-208ENST00000417285 NPAS1Q99742 590 aa22.68■■□□□ 1.22
VEGFA-208ENST00000417285 NUF2Q9BZD4 464 aa22.68■■□□□ 1.22
VEGFA-208ENST00000417285 TNFSF11O14788 317 aa22.67■■□□□ 1.22
VEGFA-208ENST00000417285 LBPP18428 481 aa22.67■■□□□ 1.22
VEGFA-208ENST00000417285 HOXC12P31275 282 aa22.67■■□□□ 1.22
VEGFA-208ENST00000417285 ZNF117Q03924 483 aa22.67■■□□□ 1.22
VEGFA-208ENST00000417285 BST1Q10588 318 aa22.67■■□□□ 1.22
VEGFA-208ENST00000417285 BEND4Q6ZU67 534 aa22.67■■□□□ 1.22
VEGFA-208ENST00000417285 STK32CQ86UX6 486 aa22.67■■□□□ 1.22
VEGFA-208ENST00000417285 CLECL1Q8IZS7 167 aa22.67■■□□□ 1.22
VEGFA-208ENST00000417285 VPS37AQ8NEZ2 397 aa22.67■■□□□ 1.22
VEGFA-208ENST00000417285 PIGTQ969N2 578 aa22.67■■□□□ 1.22
VEGFA-208ENST00000417285 REXO5Q96IC2 774 aaKnown RBP22.67■■□□□ 1.22
VEGFA-208ENST00000417285 PIP5K1AQ99755 562 aa22.67■■□□□ 1.22
VEGFA-208ENST00000417285 KLHL4Q9C0H6 718 aa22.67■■□□□ 1.22
VEGFA-208ENST00000417285 MEAF6Q9HAF1 191 aa22.67■■□□□ 1.22
VEGFA-208ENST00000417285 DLL4Q9NR61 685 aa22.67■■□□□ 1.22
VEGFA-208ENST00000417285 ICAM5Q9UMF0 924 aa22.67■■□□□ 1.22
VEGFA-208ENST00000417285 DTNAQ9Y4J8 743 aa22.67■■□□□ 1.22
VEGFA-208ENST00000417285 GPC6Q9Y625 555 aaPredicted RBP22.67■■□□□ 1.22
VEGFA-208ENST00000417285 KCNE3Q9Y6H6 103 aa22.67■■□□□ 1.22
VEGFA-208ENST00000417285 RNF103-CHMP3A0A140T963 221 aa22.66■■□□□ 1.22
VEGFA-208ENST00000417285 NUDT14O95848 222 aa22.66■■□□□ 1.22
VEGFA-208ENST00000417285 FPR1P21462 350 aa22.66■■□□□ 1.22
VEGFA-208ENST00000417285 MATN1P21941 496 aa22.66■■□□□ 1.22
VEGFA-208ENST00000417285 EXOC3L2Q2M3D2 409 aa22.66■■□□□ 1.22
VEGFA-208ENST00000417285 ANXA8L1Q5VT79 327 aa22.66■■□□□ 1.22
VEGFA-208ENST00000417285 C6orf120Q7Z4R8 191 aa22.66■■□□□ 1.22
VEGFA-208ENST00000417285 OR5D16Q8NGK9 328 aa22.66■■□□□ 1.22
VEGFA-208ENST00000417285 OR4A15Q8NGL6 344 aa22.66■■□□□ 1.22
VEGFA-208ENST00000417285 TESCQ96BS2 214 aa22.66■■□□□ 1.22
VEGFA-208ENST00000417285 PIK3IP1Q96FE7 263 aa22.66■■□□□ 1.22
VEGFA-208ENST00000417285 SLC35G5Q96KT7 338 aa22.66■■□□□ 1.22
VEGFA-208ENST00000417285 TMEM185BQ9H7F4 350 aa22.66■■□□□ 1.22
VEGFA-208ENST00000417285 PNPOQ9NVS9 261 aa22.66■■□□□ 1.22
VEGFA-208ENST00000417285 CLEC4AQ9UMR7 237 aa22.66■■□□□ 1.22
VEGFA-208ENST00000417285 CARD8Q9Y2G2 431 aa22.66■■□□□ 1.22
VEGFA-208ENST00000417285 NPIPA5A0A0B4J1W7 369 aa22.65■■□□□ 1.22
VEGFA-208ENST00000417285 NPIPA7E9PJI5 369 aa22.65■■□□□ 1.22
VEGFA-208ENST00000417285 NPIPB9F8W1W9 429 aa22.65■■□□□ 1.22
VEGFA-208ENST00000417285 ZNF195O14628 629 aa22.65■■□□□ 1.22
VEGFA-208ENST00000417285 ARHGEF9O43307 516 aa22.65■■□□□ 1.22
VEGFA-208ENST00000417285 EIF4E2O60573 245 aaKnown RBP22.65■■□□□ 1.22
VEGFA-208ENST00000417285 ERLIN1O75477 346 aa22.65■■□□□ 1.22
VEGFA-208ENST00000417285 AK1P00568 194 aa22.65■■□□□ 1.22
VEGFA-208ENST00000417285 NPIPA8P0DM63 369 aa22.65■■□□□ 1.22
VEGFA-208ENST00000417285 CCKARP32238 428 aa22.65■■□□□ 1.22
VEGFA-208ENST00000417285 CLNS1AP54105 237 aaKnown RBP22.65■■□□□ 1.22
VEGFA-208ENST00000417285 NKX6-1P78426 367 aaPredicted RBP22.65■■□□□ 1.22
VEGFA-208ENST00000417285 DPY19L1Q2PZI1 675 aa22.65■■□□□ 1.22
VEGFA-208ENST00000417285 SHEQ5VZ18 495 aa22.65■■□□□ 1.22
VEGFA-208ENST00000417285 CBLN3Q6UW01 205 aa22.65■■□□□ 1.22
VEGFA-208ENST00000417285 ZNF550Q7Z398 422 aa22.65■■□□□ 1.22
VEGFA-208ENST00000417285 GPR119Q8TDV5 335 aa22.65■■□□□ 1.22
VEGFA-208ENST00000417285 SDF2Q99470 211 aa22.65■■□□□ 1.22
VEGFA-208ENST00000417285 PRSS51A0A1B0GVH4 220 aa22.64■■□□□ 1.21
VEGFA-208ENST00000417285 TMEM120BA0PK00 339 aa22.64■■□□□ 1.21
VEGFA-208ENST00000417285 SIAH2O43255 324 aa22.64■■□□□ 1.21
VEGFA-208ENST00000417285 RPS26P62854 115 aaKnown RBP22.64■■□□□ 1.21
VEGFA-208ENST00000417285 RNPS1Q15287 305 aaKnown RBP22.64■■□□□ 1.21
VEGFA-208ENST00000417285 ACKR1Q16570 336 aa22.64■■□□□ 1.21
VEGFA-208ENST00000417285 ZNF614Q8N883 585 aa22.64■■□□□ 1.21
VEGFA-208ENST00000417285 FBXO27Q8NI29 283 aa22.64■■□□□ 1.21
VEGFA-208ENST00000417285 CPNE4Q96A23 557 aaPredicted RBP22.64■■□□□ 1.21
VEGFA-208ENST00000417285 ARL8AQ96BM9 186 aa22.64■■□□□ 1.21
VEGFA-208ENST00000417285 MARK4Q96L34 752 aa22.64■■□□□ 1.21
VEGFA-208ENST00000417285 MRGPRX4Q96LA9 322 aa22.64■■□□□ 1.21
VEGFA-208ENST00000417285 NMUR2Q9GZQ4 415 aa22.64■■□□□ 1.21
VEGFA-208ENST00000417285 OR10A4Q9H209 315 aa22.64■■□□□ 1.21
VEGFA-208ENST00000417285 GP6Q9HCN6 339 aa22.64■■□□□ 1.21
VEGFA-208ENST00000417285 FOXF1Q12946 379 aa22.63■■□□□ 1.21
VEGFA-208ENST00000417285 DDX59Q5T1V6 619 aaKnown RBP eCLIP22.63■■□□□ 1.211e-7■□□□□ 10.9
VEGFA-208ENST00000417285 ANKRD34AQ69YU3 496 aa22.63■■□□□ 1.21
VEGFA-208ENST00000417285 OGFOD2Q6N063 350 aa22.63■■□□□ 1.21
VEGFA-208ENST00000417285 STAC2Q6ZMT1 411 aa22.63■■□□□ 1.21
VEGFA-208ENST00000417285 CXorf67Q86X51 503 aaPredicted RBP22.63■■□□□ 1.21
VEGFA-208ENST00000417285 LRRC75A-AS1Q8N1F1 130 aa22.63■■□□□ 1.21
VEGFA-208ENST00000417285 WFDC11Q8NEX6 87 aa22.63■■□□□ 1.21
VEGFA-208ENST00000417285 TOR1AIP2Q8NFQ8 470 aa22.63■■□□□ 1.21
VEGFA-208ENST00000417285 OR5W2Q8NH69 310 aa22.63■■□□□ 1.21
VEGFA-208ENST00000417285 ZC3HAV1LQ96H79 300 aaKnown RBP22.63■■□□□ 1.21
VEGFA-208ENST00000417285 KLHDC3Q9BQ90 382 aa22.63■■□□□ 1.21
VEGFA-208ENST00000417285 EXD2Q9NVH0 621 aa22.63■■□□□ 1.21
VEGFA-208ENST00000417285 THAP1Q9NVV9 213 aa22.63■■□□□ 1.21
VEGFA-208ENST00000417285 GPR52Q9Y2T5 361 aa22.63■■□□□ 1.21
VEGFA-208ENST00000417285 NUP214P35658 2090 aaPredicted RBP22.62■■□□□ 1.21
VEGFA-208ENST00000417285 ANKRD28O15084 1053 aa22.62■■□□□ 1.21
VEGFA-208ENST00000417285 ZNF264O43296 627 aa22.62■■□□□ 1.21
VEGFA-208ENST00000417285 OIP5O43482 229 aa22.62■■□□□ 1.21
VEGFA-208ENST00000417285 EFNA2O43921 213 aa22.62■■□□□ 1.21
VEGFA-208ENST00000417285 DIAPH2O60879 1101 aa22.62■■□□□ 1.21
VEGFA-208ENST00000417285 SCN2BO60939 215 aa22.62■■□□□ 1.21
VEGFA-208ENST00000417285 STX11O75558 287 aa22.62■■□□□ 1.21
VEGFA-208ENST00000417285 UQCRC2P22695 453 aa22.62■■□□□ 1.21
VEGFA-208ENST00000417285 SFTPDP35247 375 aa22.62■■□□□ 1.21
VEGFA-208ENST00000417285 WDR4P57081 412 aaKnown RBP22.62■■□□□ 1.21
VEGFA-208ENST00000417285 KRTAP21-3Q3LHN1 58 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms