RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 PLPP2O43688 288 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 ICMTO60725 284 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 RPN2P04844 631 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 AHCYP23526 432 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 ERP29P30040 261 aaKnown RBP9.14□□□□□ -0.95
SS18-203ENST00000415083 BMP8BP34820 402 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 GJA4P35212 333 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 CST6Q15828 149 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 PRPF38BQ5VTL8 546 aaKnown RBP9.14□□□□□ -0.95
SS18-203ENST00000415083 TRIQKQ629K1 86 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 SEZ6L2Q6UXD5 910 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 BMP8AQ7Z5Y6 402 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 OR4N4Q8N0Y3 316 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 LNX2Q8N448 690 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 OR5W2Q8NH69 310 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 FGF13Q92913 245 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 ORAI1Q96D31 301 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 SCMH1Q96GD3 660 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 GAS2L1Q99501 681 aaPredicted RBP9.14□□□□□ -0.95
SS18-203ENST00000415083 TEAD3Q99594 435 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 THAP7Q9BT49 309 aaPredicted RBP9.14□□□□□ -0.95
SS18-203ENST00000415083 GTPBP2Q9BX10 602 aaKnown RBP9.14□□□□□ -0.95
SS18-203ENST00000415083 GON7Q9BXV9 100 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 ZNF350Q9GZX5 532 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 MKRN2Q9H000 416 aaKnown RBP9.14□□□□□ -0.95
SS18-203ENST00000415083 NIPAL2Q9H841 368 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 PRKAG2Q9UGJ0 569 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 SIGLEC7Q9Y286 467 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 CA5BQ9Y2D0 317 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 IRGMA1A4Y4 181 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 LINC01553A4QN01 128 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 TBC1D3BA6NDS4 549 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 SLC9B1P1A6NJY1 282 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 C4orf47A7E2U8 309 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 PRR32B1ATL7 298 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 FABP7O15540 132 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 GALP22466 123 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 AK4P27144 223 aaPredicted RBP9.13□□□□□ -0.95
SS18-203ENST00000415083 MPIP34949 423 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 LSSP48449 732 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 PRR5P85299 388 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 FOXK2Q01167 660 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 OR1Q1Q15612 314 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 GPR68Q15743 365 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 MRPL2Q5T653 305 aaKnown RBP9.13□□□□□ -0.95
SS18-203ENST00000415083 FCRL6Q6DN72 434 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 SFXN4Q6P4A7 337 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 C16orf62Q7Z3J2 963 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 ELMOD2Q8IZ81 293 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 ZNF687Q8N1G0 1237 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 CYB561A3Q8NBI2 242 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 C19orf18Q8NEA5 215 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 PCNPQ8WW12 178 aaKnown RBP9.13□□□□□ -0.95
SS18-203ENST00000415083 RAB7BQ96AH8 199 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 MOAP1Q96BY2 351 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 IL23AQ9NPF7 189 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 EVA1BQ9NVM1 165 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 COQ3Q9NZJ6 369 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 TEKT2Q9UIF3 430 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 HSPB11Q9Y547 144 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 GXYLT2A0PJZ3 443 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 CDHR4A6H8M9 788 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 PRR23AA6NEV1 266 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 UNC119BA6NIH7 251 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 INMT-MINDY4F8WBC2 141 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 ATF1P18846 271 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 BDH1Q02338 343 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 BCL2L15Q5TBC7 163 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 FAAH2Q6GMR7 532 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 MTFR2Q6P444 385 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 NRROSQ86YC3 692 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 OR4E2Q8NGC2 313 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 ABHD4Q8TB40 342 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 SUSD6Q92537 303 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 RFKQ969G6 155 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 YIPF5Q969M3 257 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 COL26A1Q96A83 441 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 NACC2Q96BF6 587 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 OTULINQ96BN8 352 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 SCARF2Q96GP6 870 aaPredicted RBP9.13□□□□□ -0.95
SS18-203ENST00000415083 OR2A5Q96R48 311 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 COQ7Q99807 217 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 TIMM29Q9BSF4 260 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 C1QTNF2Q9BXJ5 285 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 PILRAQ9UKJ1 303 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 STON1Q9Y6Q2 735 aa9.13□□□□□ -0.95
SS18-203ENST00000415083 A0A1W2PPK0 400 aa9.12□□□□□ -0.95
SS18-203ENST00000415083 C7orf66A4D0T2 115 aa9.12□□□□□ -0.95
SS18-203ENST00000415083 LEUTXA8MZ59 168 aa9.12□□□□□ -0.95
SS18-203ENST00000415083 NPR2P20594 1047 aa9.12□□□□□ -0.95
SS18-203ENST00000415083 ACVR1BP36896 505 aa9.12□□□□□ -0.95
SS18-203ENST00000415083 MAGEB1P43366 347 aa9.12□□□□□ -0.95
SS18-203ENST00000415083 ZP1P60852 638 aa9.12□□□□□ -0.95
SS18-203ENST00000415083 DGCR2P98153 550 aa9.12□□□□□ -0.95
SS18-203ENST00000415083 TNFRSF17Q02223 184 aa9.12□□□□□ -0.95
SS18-203ENST00000415083 TFF2Q03403 129 aa9.12□□□□□ -0.95
SS18-203ENST00000415083 DMKNQ6E0U4 476 aaPredicted RBP9.12□□□□□ -0.95
SS18-203ENST00000415083 ARL9Q6T311 187 aa9.12□□□□□ -0.95
SS18-203ENST00000415083 SLC38A6Q8IZM9 456 aa9.12□□□□□ -0.95
SS18-203ENST00000415083 HDDC3Q8N4P3 179 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms