RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 METTL25Q8N6Q8 603 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 FNDC9Q8TBE3 224 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 FIG4Q92562 907 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 RAB8BQ92930 207 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 ROPN1LQ96C74 230 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 OR52B2Q96RD2 323 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 SH3GL2Q99962 352 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 INPP5KQ9BT40 448 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 RBM24Q9BX46 236 aaKnown RBP10.09□□□□□ -0.79
RFFL-204ENST00000414419 ZNF350Q9GZX5 532 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 TCF7L2Q9NQB0 619 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 POLE3Q9NRF9 147 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 PACSIN3Q9UKS6 424 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 MCTS1Q9ULC4 181 aaKnown RBP10.09□□□□□ -0.79
RFFL-204ENST00000414419 ZNF175Q9Y473 711 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 GPC6Q9Y625 555 aaPredicted RBP10.09□□□□□ -0.79
RFFL-204ENST00000414419 ANKRD17O75179 2603 aaKnown RBP10.08□□□□□ -0.8
RFFL-204ENST00000414419 A0A1W2PNV4 684 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 TUBAL3A6NHL2 446 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 NPIPB9F8W1W9 429 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 ZNF195O14628 629 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 PLGP00747 810 aaPredicted RBP10.08□□□□□ -0.8
RFFL-204ENST00000414419 OPN1LWP04000 364 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 LINGO3P0C6S8 592 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 H2AFXP16104 143 aaPredicted RBP10.08□□□□□ -0.8
RFFL-204ENST00000414419 ELK4P28324 431 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 ADH6P28332 368 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 CDKN2CP42773 168 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 POLR2JP52435 117 aaKnown RBP10.08□□□□□ -0.8
RFFL-204ENST00000414419 FGFBP1Q14512 234 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 ZNF141Q15928 474 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 NDUFAF6Q330K2 333 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 HBMQ6B0K9 141 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 EIF3MQ7L2H7 374 aaKnown RBP10.08□□□□□ -0.8
RFFL-204ENST00000414419 MAVSQ7Z434 540 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 ZNF619Q8N2I2 560 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 OR5W2Q8NH69 310 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 OR10D3Q8NH80 312 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 FBXO27Q8NI29 283 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 OIT3Q8WWZ8 545 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 REXO5Q96IC2 774 aaKnown RBP10.08□□□□□ -0.8
RFFL-204ENST00000414419 ZNF845Q96IR2 970 aaPredicted RBP10.08□□□□□ -0.8
RFFL-204ENST00000414419 ITCHQ96J02 903 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 LAT2Q9GZY6 243 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 TMEM185BQ9H7F4 350 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 SLCO1B3Q9NPD5 702 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 TIGARQ9NQ88 270 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 SDR39U1Q9NRG7 319 aaPredicted RBP10.08□□□□□ -0.8
RFFL-204ENST00000414419 JKAMPQ9P055 326 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 ICAM5Q9UMF0 924 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 LIPT1Q9Y234 373 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 TACC2O95359 2948 aa10.08□□□□□ -0.8
RFFL-204ENST00000414419 HMGN4O00479 90 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 TNFSF11O14788 317 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 MSTNO14793 375 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 OIP5O43482 229 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 CXCL13O43927 109 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 KIAA0513O60268 411 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 UGT2B17O75795 530 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 H6PDO95479 791 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 GUSBP08236 651 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 UBTFL6P0CB48 400 aaPredicted RBP10.07□□□□□ -0.8
RFFL-204ENST00000414419 NR2F1P10589 423 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 PGCP20142 388 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 PSMA4P25789 261 aaKnown RBP10.07□□□□□ -0.8
RFFL-204ENST00000414419 SFTPDP35247 375 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 CPOXP36551 454 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 KCNJ5P48544 419 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 CTBP2P56545 445 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 CARD18P57730 90 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 SIRPAP78324 504 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 SORDQ00796 357 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 FOXF1Q12946 379 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 QPRTQ15274 297 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 TIGD2Q4W5G0 525 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 C6orf10Q5SRN2 563 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 FBXW10Q5XX13 1052 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 GTF2IRD2BQ6EKJ0 949 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 TYW3Q6IPR3 259 aaKnown RBP10.07□□□□□ -0.8
RFFL-204ENST00000414419 DNAJC14Q6Y2X3 702 aaPredicted RBP10.07□□□□□ -0.8
RFFL-204ENST00000414419 MSANTD1Q6ZTZ1 278 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 OLIG3Q7RTU3 272 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 GTF2IRD2Q86UP8 949 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 GGNQ86UU5 652 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 ATP6V1C2Q8NEY4 427 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 OR2V1Q8NHB1 315 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 POC1BQ8TC44 478 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 PNPT1Q8TCS8 783 aaKnown RBP10.07□□□□□ -0.8
RFFL-204ENST00000414419 GPR119Q8TDV5 335 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 FAM222BQ8WU58 562 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 TMEM234Q8WY98 164 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 OSTF1Q92882 214 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 MRGPRX4Q96LA9 322 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 KLHL15Q96M94 604 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 TRNT1Q96Q11 434 aaKnown RBP10.07□□□□□ -0.8
RFFL-204ENST00000414419 NPAS1Q99742 590 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 THUMPD3Q9BV44 507 aaKnown RBP10.07□□□□□ -0.8
RFFL-204ENST00000414419 RNF122Q9H9V4 155 aa10.07□□□□□ -0.8
RFFL-204ENST00000414419 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.07□□□□□ -0.8
RFFL-204ENST00000414419 CRIM1Q9NZV1 1036 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms