RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 FXYD1O00168 92 aa21.56■■□□□ 1.04
UBE2E3-202ENST00000410062 HNRNPCL1O60812 293 aaKnown RBP21.56■■□□□ 1.04
UBE2E3-202ENST00000410062 DBIP07108 87 aaKnown RBP21.56■■□□□ 1.04
UBE2E3-202ENST00000410062 LINGO3P0C6S8 592 aa21.56■■□□□ 1.04
UBE2E3-202ENST00000410062 HNRNPCL4P0DMR1 293 aa21.56■■□□□ 1.04
UBE2E3-202ENST00000410062 ARAFP10398 606 aa21.56■■□□□ 1.04
UBE2E3-202ENST00000410062 GABRA1P14867 456 aa21.56■■□□□ 1.04
UBE2E3-202ENST00000410062 IL7RP16871 459 aa21.56■■□□□ 1.04
UBE2E3-202ENST00000410062 SUMO3P55854 103 aaPredicted RBP21.56■■□□□ 1.04
UBE2E3-202ENST00000410062 PLAURQ03405 335 aa21.56■■□□□ 1.04
UBE2E3-202ENST00000410062 C1orf185Q5T7R7 199 aa21.56■■□□□ 1.04
UBE2E3-202ENST00000410062 TOR1AIP2Q8NFQ8 470 aa21.56■■□□□ 1.04
UBE2E3-202ENST00000410062 OR5W2Q8NH69 310 aa21.56■■□□□ 1.04
UBE2E3-202ENST00000410062 RP9Q8TA86 221 aaKnown RBP21.56■■□□□ 1.04
UBE2E3-202ENST00000410062 WDR60Q8WVS4 1066 aa21.56■■□□□ 1.04
UBE2E3-202ENST00000410062 PMM1Q92871 262 aa21.56■■□□□ 1.04
UBE2E3-202ENST00000410062 ZNF524Q96C55 264 aa21.56■■□□□ 1.04
UBE2E3-202ENST00000410062 RCN3Q96D15 328 aa21.56■■□□□ 1.04
UBE2E3-202ENST00000410062 DOPEY1Q5JWR5 2465 aa21.55■■□□□ 1.04
UBE2E3-202ENST00000410062 AHRRA9YTQ3 701 aa21.55■■□□□ 1.04
UBE2E3-202ENST00000410062 KDM4EB2RXH2 506 aaPredicted RBP21.55■■□□□ 1.04
UBE2E3-202ENST00000410062 C5orf58C9J3I9 102 aa21.55■■□□□ 1.04
UBE2E3-202ENST00000410062 COX4I1P13073 169 aa21.55■■□□□ 1.04
UBE2E3-202ENST00000410062 CPN1P15169 458 aa21.55■■□□□ 1.04
UBE2E3-202ENST00000410062 POU3F2P20265 443 aaPredicted RBP21.55■■□□□ 1.04
UBE2E3-202ENST00000410062 CLDN18P56856 261 aa21.55■■□□□ 1.04
UBE2E3-202ENST00000410062 PMPCAQ10713 525 aa21.55■■□□□ 1.04
UBE2E3-202ENST00000410062 CBFBQ13951 182 aa21.55■■□□□ 1.04
UBE2E3-202ENST00000410062 ADRM1Q16186 407 aa21.55■■□□□ 1.04
UBE2E3-202ENST00000410062 NANOGP8Q6NSW7 305 aa21.55■■□□□ 1.04
UBE2E3-202ENST00000410062 RPTNQ6XPR3 784 aa21.55■■□□□ 1.04
UBE2E3-202ENST00000410062 B3GNT6Q6ZMB0 384 aa21.55■■□□□ 1.04
UBE2E3-202ENST00000410062 VRK2Q86Y07 508 aa21.55■■□□□ 1.04
UBE2E3-202ENST00000410062 PCYOX1LQ8NBM8 494 aa21.55■■□□□ 1.04
UBE2E3-202ENST00000410062 FAM71CQ8NEG0 241 aa21.55■■□□□ 1.04
UBE2E3-202ENST00000410062 OR52P1PQ8NH57 321 aa21.55■■□□□ 1.04
UBE2E3-202ENST00000410062 PHF10Q8WUB8 498 aaKnown RBP21.55■■□□□ 1.04
UBE2E3-202ENST00000410062 CNOT9Q92600 299 aaKnown RBP21.55■■□□□ 1.04
UBE2E3-202ENST00000410062 ZBTB8AQ96BR9 441 aa21.55■■□□□ 1.04
UBE2E3-202ENST00000410062 RNF145Q96MT1 663 aa21.55■■□□□ 1.04
UBE2E3-202ENST00000410062 NANOGQ9H9S0 305 aa21.55■■□□□ 1.04
UBE2E3-202ENST00000410062 PHF3Q92576 2039 aaKnown RBP21.55■■□□□ 1.04
UBE2E3-202ENST00000410062 PGM3O95394 542 aa21.54■■□□□ 1.04
UBE2E3-202ENST00000410062 NID1P14543 1247 aa21.54■■□□□ 1.04
UBE2E3-202ENST00000410062 ZNF708P17019 499 aa21.54■■□□□ 1.04
UBE2E3-202ENST00000410062 CDK6Q00534 326 aa21.54■■□□□ 1.04
UBE2E3-202ENST00000410062 ACSF3Q4G176 576 aaPredicted RBP21.54■■□□□ 1.04
UBE2E3-202ENST00000410062 UBQLNLQ8IYU4 475 aa21.54■■□□□ 1.04
UBE2E3-202ENST00000410062 GTPBP8Q8N3Z3 284 aaPredicted RBP21.54■■□□□ 1.04
UBE2E3-202ENST00000410062 POC1BQ8TC44 478 aa21.54■■□□□ 1.04
UBE2E3-202ENST00000410062 SMPDL3BQ92485 455 aa21.54■■□□□ 1.04
UBE2E3-202ENST00000410062 CCT8L2Q96SF2 557 aa21.54■■□□□ 1.04
UBE2E3-202ENST00000410062 TTYH2Q9BSA4 534 aa21.54■■□□□ 1.04
UBE2E3-202ENST00000410062 TMEM38AQ9H6F2 299 aa21.54■■□□□ 1.04
UBE2E3-202ENST00000410062 KAT8Q9H7Z6 458 aaKnown RBP21.54■■□□□ 1.04
UBE2E3-202ENST00000410062 BCL2L10Q9HD36 194 aa21.54■■□□□ 1.04
UBE2E3-202ENST00000410062 ARL2BPQ9Y2Y0 163 aa21.54■■□□□ 1.04
UBE2E3-202ENST00000410062 H0Y3Z8 333 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 ZNF17P17021 662 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 NUP107P57740 925 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 FOXF1Q12946 379 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 SCARB2Q14108 478 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 CYP51A1Q16850 503 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 RABL3Q5HYI8 236 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 MRPL2Q5T653 305 aaKnown RBP21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 PRAMEF8Q5VWM4 474 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 PRAMEF7Q5VXH5 474 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 TMEM211Q6ICI0 200 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 BBS10Q8TAM1 723 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 ITLN2Q8WWU7 325 aaPredicted RBP21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 RLIMQ9NVW2 624 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 NCOA6Q14686 2063 aaPredicted RBP21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 C7orf72A4D263 438 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 H0YC42 278 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 LINC01387J3KSC0 135 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 NPPAP01160 153 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 HOXD4P09016 255 aaPredicted RBP21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 GLI4P10075 376 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 PEPDP12955 493 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 SLC6A2P23975 617 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 PSMA4P25789 261 aaKnown RBP21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 RYKP34925 604 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 PTGER4P35408 488 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 TPD52P55327 224 aaPredicted RBP21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 QPRTQ15274 297 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 LIN52Q52LA3 116 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 REEP3Q6NUK4 255 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 ZNF836Q6ZNA1 936 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 MRGPRGQ86SM5 289 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 PTOV1Q86YD1 416 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 CMIPQ8IY22 773 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 OR10A6Q8NH74 314 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 FBXO27Q8NI29 283 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 TRIB1Q96RU8 372 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 TUBA1CQ9BQE3 449 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 GID8Q9NWU2 228 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 DNAJB12Q9NXW2 375 aaKnown RBP21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 ADAM21Q9UKJ8 722 aa21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 ZNF443Q9Y2A4 671 aaPredicted RBP21.53■■□□□ 1.04
UBE2E3-202ENST00000410062 USP9YO00507 2555 aaPredicted RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms